RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 SOHLH2Q9NX45 425 aa13.15□□□□□ -0.3
RANBP3-229ENST00000592771 NTNG1Q9Y2I2 539 aa13.15□□□□□ -0.3
RANBP3-229ENST00000592771 CSNK1G3Q9Y6M4 447 aa13.15□□□□□ -0.3
RANBP3-229ENST00000592771 ARID1BQ8NFD5 2236 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-229ENST00000592771 GXYLT2A0PJZ3 443 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 H0YIG0 161 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 H3BMH7 237 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 ZNF749O43361 778 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 CH25HO95992 272 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 GABRA3P34903 492 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 EMDP50402 254 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 DMWDQ09019 674 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 EFR3AQ14156 821 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 GALEQ14376 348 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 WDR45BQ5MNZ6 344 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 MEX3DQ86XN8 651 aaKnown RBP13.14□□□□□ -0.31
RANBP3-229ENST00000592771 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 LNX2Q8N448 690 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 SLC2A12Q8TD20 617 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 TMEM255BQ8WV15 326 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 SAMD8Q96LT4 415 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 HS6ST2Q96MM7 605 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 IER2Q9BTL4 223 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 ALG8Q9BVK2 526 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 PRTFDC1Q9NRG1 225 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 SEMA5BQ9P283 1151 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 NLKQ9UBE8 527 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-229ENST00000592771 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 CACNA1EQ15878 2313 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 CABIN1Q9Y6J0 2220 aa13.14□□□□□ -0.31
RANBP3-229ENST00000592771 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SMIM30A4D0T7 59 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 FAM86C2PA6NEL3 165 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 INMT-MINDY4F8WBC2 141 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 LRRTM2O43300 516 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 PLPP2O43688 288 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 NUDT21O43809 227 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 GIMD1P0DJR0 217 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 ARSBP15848 533 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 BMP7P18075 431 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 HK1P19367 917 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 PSG6Q00889 435 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 RIPPLY1Q0D2K3 151 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 MRPL2Q5T653 305 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 MAMSTRQ6ZN01 415 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 CREB3L2Q70SY1 520 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 MED25Q71SY5 747 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 ZNF767PQ75MW2 155 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 VASH1Q7L8A9 365 aaPredicted RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 CDK20Q8IZL9 346 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SIRT6Q8N6T7 355 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 TEX19Q8NA77 164 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 BBS1Q8NFJ9 593 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.317e-7■■□□□ 13.4
RANBP3-229ENST00000592771 VSTM2LQ96N03 204 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 DCLRE1CQ96SD1 692 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 OR52D1Q9H346 318 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 LRIT1Q9P2V4 623 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 EXTL2Q9UBQ6 330 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 BAIAP2Q9UQB8 552 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 TMEM184BQ9Y519 407 aaPredicted RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 IGHV1OR21-1A0A087WYE8 117 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 PEX12O00623 359 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 CLDN4O14493 209 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 BHLHE40O14503 412 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SOCS6O14544 535 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 LYPD3O95274 346 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 MT-ND5P03915 603 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 DCNP07585 359 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 CD8BP10966 210 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 ELK1P19419 428 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SLC6A1P30531 599 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 GALNSP34059 522 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 HSD17B7P56937 341 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 PLAURQ03405 335 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 STX4Q12846 297 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 GRM7Q14831 915 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 ANGPT1Q15389 498 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 NKAIN2Q5VXU1 208 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 FIGNL1Q6PIW4 674 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 TMPRSS11FQ6ZWK6 438 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 OAFQ86UD1 273 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SLC25A45Q8N413 288 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 OR51G2Q8NGK0 314 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 C17orf50Q8WW18 174 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 TTC9Q92623 222 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 RIT1Q92963 219 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 PRSS27Q9BQR3 290 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 NDC1Q9BTX1 674 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SPRTNQ9H040 489 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms