RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 OR2T11Q8NH01 316 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 KCNS3Q9BQ31 491 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 BHLHE41Q9C0J9 482 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 EMCNQ9ULC0 261 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 TMED5Q9Y3A6 229 aa17.14■□□□□ 0.33
PRKCSH-216ENST00000592445 ARFGEF3Q5TH69 2177 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 MEGF8Q7Z7M0 2845 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 PDLIM1O00151 329 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 PMS2P2O95744 297 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 WNT11O96014 354 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 LINC00032P0C843 101 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 APOBEC1P41238 236 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 ZNF563Q8TA94 476 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 OR5P2Q8WZ92 322 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 OR7D2Q96RA2 312 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 SDF2Q99470 211 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 NMUR2Q9GZQ4 415 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 OCEL1Q9H607 264 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 PARPBPQ9NWS1 579 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 ATP6V1HQ9UI12 483 aa17.13■□□□□ 0.33
PRKCSH-216ENST00000592445 AZIN1O14977 448 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 SCAMP2O15127 329 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 DNAJA2O60884 412 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 CHEK2O96017 543 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 LAMP1P11279 417 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 BCKDHAP12694 445 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 CDH2P19022 906 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 APEX1P27695 318 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 RPL3P39023 403 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 CHN2P52757 468 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 OR2B6P58173 313 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 DNAJB13P59910 316 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 LIPMQ5VYY2 423 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 EIF3MQ7L2H7 374 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 LINC01356Q8N9X3 169 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 OR5D16Q8NGK9 328 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 ARL5BQ96KC2 179 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 CTPS2Q9NRF8 586 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 SLC7A10Q9NS82 523 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 CHRNA9Q9UGM1 479 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 METRNQ9UJH8 293 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 SLC9A8Q9Y2E8 581 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 HDGFL3Q9Y3E1 203 aa17.12■□□□□ 0.33
PRKCSH-216ENST00000592445 B9A039 149 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 KLF11O14901 512 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 ANKRD28O15084 1053 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 LSM1O15116 133 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 DNPH1O43598 174 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 GLRA3O75311 464 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 SNUPNO95149 360 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 C6orf47O95873 294 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 ZNF141Q15928 474 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 LSM12Q3MHD2 195 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 C1QTNF12Q5T7M4 302 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 BHLHB9Q6PI77 547 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 OR5AK3PQ8NH89 298 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 PSMA8Q8TAA3 256 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 SFXN5Q8TD22 340 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 CCDC106Q9BWC9 280 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 OR11A1Q9GZK7 315 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 RAB1BQ9H0U4 201 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 TUBB1Q9H4B7 451 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 CA10Q9NS85 328 aa17.11■□□□□ 0.33
PRKCSH-216ENST00000592445 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 CFLARO15519 480 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 FCMRO60667 390 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 STX11O75558 287 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 SLU7O95391 586 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 STAMBPO95630 424 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 ABHD2P08910 425 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 CCNA2P20248 432 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 MPGP29372 298 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 ECHS1P30084 290 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 IL2RGP31785 369 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 RYKP34925 604 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 ETF1P62495 437 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 RPS26P62854 115 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 TSPO2Q5TGU0 170 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 VHLLQ6RSH7 139 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 RINLQ6ZS11 566 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 DDIASQ8IXT1 998 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 CCDC63Q8NA47 563 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 HPS1Q92902 700 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 MOAP1Q96BY2 351 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 ATAD3AQ9NVI7 634 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 TMEM181Q9P2C4 612 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 TBK1Q9UHD2 729 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 KCNE5Q9UJ90 142 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 MKLN1Q9UL63 735 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 FLVCR1Q9Y5Y0 555 aa17.1■□□□□ 0.33
PRKCSH-216ENST00000592445 CENPVL1A0A0U1RR11 272 aa17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 UGT2B17O75795 530 aa17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 CRYAAP02489 173 aa17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 PROCP04070 461 aa17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 ERCC1P07992 297 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 OR4A8P0C604 315 aa17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 DAOP14920 347 aa17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 FKBP2P26885 142 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-216ENST00000592445 CLK1P49759 484 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms