RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	ZNF426	Q9BUY5	554 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	TRIM15	Q9C019	465 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	PRDM14	Q9GZV8	571 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	MAGIX	Q9H6Y5	334 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	EXO5	Q9H790	373 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	COQ10B	Q9H8M1	238 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	PNPLA3	Q9NST1	481 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	VNN3	Q9NY84	501 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	SLC7A7	Q9UM01	511 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	AP4B1	Q9Y6B7	739 aa		10.2	□□□□□ -0.78
CIRBP-236	ENST00000592051	SHANK1	Q9Y566	2161 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	HEATR5A	Q86XA9	2040 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051		A0A087WUJ7	227 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051		A0A1W2PNR3	127 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	OR14I1	A6ND48	311 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	LINC01387	J3KSC0	135 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	ADAMDEC1	O15204	470 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	CIB2	O75838	187 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	GPI	P06744	558 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	IMPDH2	P12268	514 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	UQCRB	P14927	111 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	KLK2	P20151	261 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	POU3F2	P20265	443 aa	Predicted RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	PTGS2	P35354	604 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	HTR3A	P46098	478 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	SELENBP1	Q13228	472 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	GXYLT1	Q4G148	440 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	ALG10B	Q5I7T1	473 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	SWT1	Q5T5J6	900 aa	Known RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	AAGAB	Q6PD74	315 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	PLXDC2	Q6UX71	529 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051		Q6ZPB1	254 aa	Predicted RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	PRICKLE2	Q7Z3G6	844 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	ZDHHC21	Q8IVQ6	265 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	OFCC1	Q8IZS5	231 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	OR5M9	Q8NGP3	310 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	FAM57A	Q8TBR7	257 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	DNAJA4	Q8WW22	397 aa	Predicted RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	SMPDL3B	Q92485	455 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	DTNBP1	Q96EV8	351 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	DNAJA3	Q96EY1	480 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	DUS3L	Q96G46	650 aa	Known RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	TUBA1C	Q9BQE3	449 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	PTDSS2	Q9BVG9	487 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	CHID1	Q9BWS9	393 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	C12orf10	Q9HB07	376 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	RPS6KB2	Q9UBS0	482 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	CHRNA9	Q9UGM1	479 aa		10.19	□□□□□ -0.78
CIRBP-236	ENST00000592051	ZNF407	Q9C0G0	2248 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SEC14L5	O43304	696 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	ZNF208	O43345	1280 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	CHP2	O43745	196 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SLC19A2	O60779	497 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	FKBP6	O75344	327 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	FABP3	P05413	133 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	RAP2A	P10114	183 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	UMPS	P11172	480 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	RHCE	P18577	417 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	CXCR1	P25024	350 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SFTPD	P35247	375 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	UQCRFS1	P47985	274 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	LIMS1	P48059	325 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	TAS2R41	P59536	307 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SRY	Q05066	204 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	CHRNB3	Q05901	458 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	LTB	Q06643	244 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	FOXD4	Q12950	439 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SEC23B	Q15437	767 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	FAM98B	Q52LJ0	330 aa	Known RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SYT14P1	Q58G82	188 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	RTL6	Q6ICC9	239 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	C3orf33	Q6P1S2	294 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	ADGRE4P	Q86SQ3	457 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	DOLPP1	Q86YN1	238 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	UBQLNL	Q8IYU4	475 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	RPRML	Q8N4K4	120 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	TMEM255B	Q8WV15	326 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SARAF	Q96BY9	339 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	KTI12	Q96EK9	354 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	ZNF845	Q96IR2	970 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	KLHL15	Q96M94	604 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	PIP5K1A	Q99755	562 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	SRXN1	Q9BYN0	137 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	POLR2J2	Q9GZM3	115 aa	Known RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	POLR2J3	Q9H1A7	115 aa	Known RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	MEPE	Q9NQ76	525 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	AURKC	Q9UQB9	309 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	CAMK2A	Q9UQM7	478 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	TESMIN	Q9Y4I5	508 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	POLE	Q07864	2286 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051	FLNC	Q14315	2725 aa		10.18	□□□□□ -0.78
CIRBP-236	ENST00000592051		A0A087WUU8	490 aa		10.17	□□□□□ -0.78
CIRBP-236	ENST00000592051	TRBV4-1	A0A0J9YWV2	114 aa		10.17	□□□□□ -0.78
CIRBP-236	ENST00000592051	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.17	□□□□□ -0.78
CIRBP-236	ENST00000592051		A8MVM7	634 aa		10.17	□□□□□ -0.78
CIRBP-236	ENST00000592051	FTCDNL1	E5RQL4	147 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms