RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NMUR2Q9GZQ4 415 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GLIPR2Q9H4G4 154 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 ESRP2Q9H6T0 727 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GP6Q9HCN6 339 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 MYNNQ9NPC7 610 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 AIG1Q9NVV5 245 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 PCDHGB4Q9UN71 923 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 VDAC3Q9Y277 283 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 POLR3HQ9Y535 204 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 HIVEP2P31629 2446 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 DNHD1Q96M86 4753 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 KIAA1324LA8MWY0 1029 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ALG1L2C9J202 215 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 H0YHG0 523 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 SCDO00767 359 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ADAMDEC1O15204 470 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 TBX1O43435 398 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CRLF1O75462 422 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 PSMG1O95456 288 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CD3EP07766 207 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 IL32P24001 234 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 MAGEA8P43361 318 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ANXA11P50995 505 aaKnown RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CLDN8P56748 225 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CARD18P57730 90 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 RPL38P63173 70 aaKnown RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 KLF10Q13118 480 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 VEZF1Q14119 521 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 C21orf62-AS1Q17RA5 79 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CLEC12BQ2HXU8 276 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 TMEM44Q2T9K0 475 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 IL23RQ5VWK5 629 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 HBMQ6B0K9 141 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 FAM71E1Q6IPT2 247 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 HEPHL1Q6MZM0 1159 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ADAM5Q6NVV9 412 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 NOXRED1Q6NXP6 359 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ZCCHC12Q6PEW1 402 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 BHLHB9Q6PI77 547 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 HACD2Q6Y1H2 254 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 GGNQ86UU5 652 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF527Q8NB42 609 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 OR2T11Q8NH01 316 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 OR2V1Q8NHB1 315 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 HSD17B8Q92506 261 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 AKAP1Q92667 903 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CPNE4Q96A23 557 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 ZBED6CLQ96FA7 236 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 THOC1Q96FV9 657 aaKnown RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 EBF4Q9BQW3 602 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CCDC106Q9BWC9 280 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 TUBB1Q9H4B7 451 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 RAD21L1Q9H4I0 556 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 WDR55Q9H6Y2 383 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 BARX1Q9HBU1 254 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 UBQLN4Q9NRR5 601 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 FAIMQ9NVQ4 179 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 GIMAP2Q9UG22 337 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 LEF1Q9UJU2 399 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 PRPF19Q9UMS4 504 aaKnown RBP8.42□□□□□ -1.06
BRCA1-226ENST00000591534 LAMP3Q9UQV4 416 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 RNF115Q9Y4L5 304 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 CCL27Q9Y4X3 112 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 KIAA1549Q9HCM3 1950 aa8.42□□□□□ -1.06
BRCA1-226ENST00000591534 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 A0A1W2PP18 115 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 CCDC154A6NI56 674 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 H3BNH8 94 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 CXCL13O43927 109 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 GMFGO60234 142 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 GMNNO75496 209 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 THBDP07204 575 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 COX4I1P13073 169 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 LOXP28300 417 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-226ENST00000591534 SLC6A8P48029 635 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 POLR2JP52435 117 aaKnown RBP8.41□□□□□ -1.06
BRCA1-226ENST00000591534 PRKAG1P54619 331 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 MANFP55145 182 aaKnown RBP8.41□□□□□ -1.06
BRCA1-226ENST00000591534 P2RY6Q15077 328 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.41□□□□□ -1.06
BRCA1-226ENST00000591534 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 AGKQ53H12 422 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 SFRP5Q5T4F7 317 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 PODNL1Q6PEZ8 512 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 Q6ZSR9 355 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 SZRD1Q7Z422 152 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 ZAR1Q86SH2 424 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.41□□□□□ -1.06
BRCA1-226ENST00000591534 SLC9A6Q92581 669 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 OSTF1Q92882 214 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 FBXW5Q969U6 566 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 EGLN2Q96KS0 407 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 MS4A4EQ96PG1 132 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 OR52B2Q96RD2 323 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 BTBD10Q9BSF8 475 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 TMEM204Q9BSN7 226 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 HOXD1Q9GZZ0 328 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 LRMDAQ9H2I8 198 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 EQTNQ9NQ60 294 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 GFOD1Q9NXC2 390 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms