RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ZNF610Q8N9Z0 462 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 LINC01560Q8TB33 94 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 RNF128Q8TEB7 428 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ABHD3Q8WU67 409 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 LURAP1Q96LR2 239 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ANKRD27Q96NW4 1050 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 SPATA9Q9BWV2 254 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ADAM19Q9H013 955 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 OPN3Q9H1Y3 402 aaPredicted RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 PLSCR4Q9NRQ2 329 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 OSGIN1Q9UJX0 560 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 PRDM4Q9UKN5 801 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 PROCRQ9UNN8 238 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 CHST2Q9Y4C5 530 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 SPIN1Q9Y657 262 aaPredicted RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 MPDZO75970 2070 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 TMED7-TICAM2A0A0A6YYA0 188 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 IGHV3-15A0A0B4J1V0 119 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 SULT2B1O00204 365 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 PRKD3O94806 890 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 EPXP11678 715 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 PRG2P13727 222 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CCNA2P20248 432 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 TACR3P29371 465 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 AGTR1P30556 359 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 ADSLP30566 484 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 PCYT1AP49585 367 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CLK1P49759 484 aaKnown RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 MAP2K6P52564 334 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 MTPNP58546 118 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 COPZ1P61923 177 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CSNK2A1P68400 391 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 FAM27E3Q08E93 113 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 SCARB2Q14108 478 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 SELPLGQ14242 412 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CAPRIN1Q14444 709 aaKnown RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CYP51A1Q16850 503 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 WBP2NLQ6ICG8 309 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 SERPINA11Q86U17 422 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 KRT73Q86Y46 540 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 HIPK4Q8NE63 616 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 OR6K3Q8NGY3 331 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 FAM222BQ8WU58 562 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 C10orf82Q8WW14 230 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 ARL5BQ96KC2 179 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF607Q96SK3 696 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 SLC39A3Q9BRY0 314 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 SPATA5L1Q9BVQ7 753 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 RSPO3Q9BXY4 272 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 OR11A1Q9GZK7 315 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 KAT8Q9H7Z6 458 aaKnown RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 GP6Q9HCN6 339 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 TMED7Q9Y3B3 224 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 HDGFL3Q9Y3E1 203 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CELSR1Q9NYQ6 3014 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 CREBBPQ92793 2442 aa8.2□□□□□ -1.1
DNMT1-223ENST00000591239 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-223ENST00000591239 LOC100653049A0A140TA62 436 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 TMEM72A0PK05 275 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 A6NNC1 897 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 BBIP1A8MTZ0 92 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 SMAD9O15198 467 aaKnown RBP8.19□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF208O43345 1280 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 FRS3O43559 492 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 CYTIPO60759 359 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 CTAG2O75638 210 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 KRT34O76011 436 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 PMS2P2O95744 297 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 NPPAP01160 153 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 FESP07332 822 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 YES1P07947 543 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 POU2F1P14859 743 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 KLK2P20151 261 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 CXCR1P25024 350 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 AQP1P29972 269 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 UGT2B10P36537 528 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 CD79BP40259 229 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 KCNJ5P48544 419 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 HOXC5Q00444 222 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 RBBP4Q09028 425 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 RASGEF1BQ0VAM2 473 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 CYLC2Q14093 348 aaPredicted RBP8.19□□□□□ -1.1
DNMT1-223ENST00000591239 MAPRE2Q15555 327 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 EXOC3L2Q2M3D2 409 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 TRMT5Q32P41 509 aaKnown RBP8.19□□□□□ -1.1
DNMT1-223ENST00000591239 MMEL1Q495T6 779 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 COQ5Q5HYK3 327 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 TMEM201Q5SNT2 666 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 NANOGP8Q6NSW7 305 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 DHRS4L2Q6PKH6 230 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 MTDHQ86UE4 582 aaKnown RBP8.19□□□□□ -1.1
DNMT1-223ENST00000591239 STK32CQ86UX6 486 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 TMEM200AQ86VY9 491 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 SNX32Q86XE0 403 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 PTOV1Q86YD1 416 aa8.19□□□□□ -1.1
DNMT1-223ENST00000591239 TUSC5Q8IXB3 177 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms