RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 STAMBPO95630 424 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 SLC7A1P30825 629 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 MAP2K6P52564 334 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 MS4A2Q01362 244 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 KCNC4Q03721 635 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ACSF3Q4G176 576 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ENTPD8Q5MY95 495 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 PDSS1Q5T2R2 415 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 HBMQ6B0K9 141 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 RTL6Q6ICC9 239 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 PGM2L1Q6PCE3 622 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ZNF613Q6PF04 617 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ULK3Q6PHR2 472 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 CYP2R1Q6VVX0 501 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 B3GNT6Q6ZMB0 384 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 DEF8Q6ZN54 512 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ATG4DQ86TL0 474 aaPredicted RBP17.22■□□□□ 0.35
DDX39A-214ENST00000590556 FJX1Q86VR8 437 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 RNF217Q8TC41 542 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ASB9Q96DX5 294 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 TRIB1Q96RU8 372 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 VKORC1Q9BQB6 163 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 MEMO1Q9Y316 297 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 UBR5O95071 2799 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-214ENST00000590556 A0A0B4J2E0 115 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 A0A1B0GX12 115 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ELOA3DA6NLF2 546 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-214ENST00000590556 CLCA1A8K7I4 914 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 TNFSF11O14788 317 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ZNF208O43345 1280 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 IFNW1P05000 195 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 PNMTP11086 282 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ATP6V1B2P21281 511 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 EIF1AXP47813 144 aaKnown RBP17.21■□□□□ 0.35
DDX39A-214ENST00000590556 CLK1P49759 484 aaKnown RBP17.21■□□□□ 0.35
DDX39A-214ENST00000590556 SGCBQ16585 318 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 CTU2Q2VPK5 515 aaKnown RBP17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ELOA3BQ3SY89 546 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 SYT14P1Q58G82 188 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ALG10BQ5I7T1 473 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 LCN8Q6JVE9 175 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 RPTNQ6XPR3 784 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ELOA3Q8NG57 546 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 OR10D3Q8NH80 312 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 DDIT4LQ96D03 193 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 SLC47A1Q96FL8 570 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 PYURFQ96I23 114 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 ADGRG7Q96K78 797 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 OR5B2Q96R09 309 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 OR11A1Q9GZK7 315 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 C12orf10Q9HB07 376 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 FAM215AQ9Y5M1 114 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 V9GYQ6 96 aa17.21■□□□□ 0.35
DDX39A-214ENST00000590556 TRAPPC13A5PLN9 417 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 CDH12P55289 794 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 CARD18P57730 90 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 TAS2R41P59536 307 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 TRAP1Q12931 704 aaKnown RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 MTX3Q5HYI7 312 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 SWT1Q5T5J6 900 aaKnown RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 TMEM211Q6ICI0 200 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 RPRMLQ8N4K4 120 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 FAM86B1Q8N7N1 296 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 ADAMTS16Q8TE57 1224 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 PHF10Q8WUB8 498 aaKnown RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 OSTF1Q92882 214 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 ZNF845Q96IR2 970 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 LRGUKQ96M69 825 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 DMRTA2Q96SC8 542 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 POLR2J2Q9GZM3 115 aaKnown RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 POLR2J3Q9H1A7 115 aaKnown RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 CALHM2Q9HA72 323 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 TIGARQ9NQ88 270 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 PAQR5Q9NXK6 330 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-214ENST00000590556 SLC5A6Q9Y289 635 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 FLNCQ14315 2725 aa17.2■□□□□ 0.34
DDX39A-214ENST00000590556 HELZ2Q9BYK8 2649 aaKnown RBP17.19■□□□□ 0.34
DDX39A-214ENST00000590556 A0A1W2PNR3 127 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 CD8B2A6NJW9 211 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 A8MVM7 634 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 CXCL13O43927 109 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 GABPB1Q06547 395 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-214ENST00000590556 NSUN5P2Q63ZY6 315 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 MTFR2Q6P444 385 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 ADGRE4PQ86SQ3 457 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 TSPYL5Q86VY4 417 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-214ENST00000590556 SLC38A4Q969I6 547 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 SLC41A3Q96GZ6 507 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 UCN2Q96RP3 112 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 TTYH2Q9BSA4 534 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 TRIM15Q9C019 465 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 AMBRA1Q9C0C7 1298 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 MMADHCQ9H3L0 296 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-214ENST00000590556 HDGFL3Q9Y3E1 203 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 PHF3Q92576 2039 aaKnown RBP17.19■□□□□ 0.34
DDX39A-214ENST00000590556 DIDO1Q9BTC0 2240 aaKnown RBP17.19■□□□□ 0.34
DDX39A-214ENST00000590556 ARHGAP21Q5T5U3 1957 aa17.19■□□□□ 0.34
DDX39A-214ENST00000590556 MPDZO75970 2070 aa17.18■□□□□ 0.34
DDX39A-214ENST00000590556 ZC3H12DA2A288 527 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms