RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 TMEM38AQ9H6F2 299 aa13□□□□□ -0.33
RFX1-206ENST00000589760 TMEM185BQ9H7F4 350 aa13□□□□□ -0.33
RFX1-206ENST00000589760 BCL2L10Q9HD36 194 aa13□□□□□ -0.33
RFX1-206ENST00000589760 ACER3Q9NUN7 267 aa13□□□□□ -0.33
RFX1-206ENST00000589760 IFT52Q9Y366 437 aa13□□□□□ -0.33
RFX1-206ENST00000589760 ZNF175Q9Y473 711 aa13□□□□□ -0.33
RFX1-206ENST00000589760 A0A0J9YW62 118 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 FBP2O00757 339 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 TNFSF11O14788 317 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 ADAMDEC1O15204 470 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 SLC22A2O15244 555 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 EFNA2O43921 213 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 PGM3O95394 542 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 OPN1LWP04000 364 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 PABPC4LP0CB38 370 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 COX6B1P14854 86 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 UQCRBP14927 111 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 IL11P20809 199 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 RYKP34925 604 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 SFTPDP35247 375 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 AGFG1P52594 562 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 EEF1A1P68104 462 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 CDK6Q00534 326 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 FOXF2Q12947 444 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 CTU2Q2VPK5 515 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 COQ5Q5HYK3 327 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 TMEM201Q5SNT2 666 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 RNF220Q5VTB9 566 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 EEF1A1P5Q5VTE0 462 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 C3orf33Q6P1S2 294 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 POMZP3Q6PJE2 187 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 ZNF836Q6ZNA1 936 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 ZNF440Q8IYI8 595 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 C10orf111Q8N326 155 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 OR2V1Q8NHB1 315 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 NFKBIDQ8NI38 313 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 UTP4Q969X6 686 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 ZNF524Q96C55 264 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 INTS12Q96CB8 462 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 PRRG4Q9BZD6 226 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 ENKD1Q9H0I2 346 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 ASH1LQ9NR48 2969 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 SERINC1Q9NRX5 453 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 MCTS1Q9ULC4 181 aaKnown RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 ZNF443Q9Y2A4 671 aaPredicted RBP12.99□□□□□ -0.33
RFX1-206ENST00000589760 CAPN7Q9Y6W3 813 aa12.99□□□□□ -0.33
RFX1-206ENST00000589760 HECTD1Q9ULT8 2610 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 CDHR4A6H8M9 788 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 CXCL13O43927 109 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 CCDC22O60826 627 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 SYNGR4O95473 234 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 CRHP06850 196 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 FCGR2AP12318 317 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 ETS2P15036 469 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 RAB6AP20340 208 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 SLC6A2P23975 617 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 APOBEC1P41238 236 aaKnown RBP12.98□□□□□ -0.33
RFX1-206ENST00000589760 IDH2P48735 452 aaKnown RBP12.98□□□□□ -0.33
RFX1-206ENST00000589760 ASCL1P50553 236 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 SEC24CP53992 1094 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 DLX5P56178 289 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 MERTKQ12866 999 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 CYLC2Q14093 348 aaPredicted RBP12.98□□□□□ -0.33
RFX1-206ENST00000589760 SCARB2Q14108 478 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 TRMT5Q32P41 509 aaKnown RBP12.98□□□□□ -0.33
RFX1-206ENST00000589760 TMEM176BQ3YBM2 270 aaPredicted RBP12.98□□□□□ -0.33
RFX1-206ENST00000589760 ZNF311Q5JNZ3 666 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 HBMQ6B0K9 141 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 REP15Q6BDI9 236 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 REEP3Q6NUK4 255 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 PPP4R4Q6NUP7 873 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 PLEKHM3Q6ZWE6 761 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 GRINAQ7Z429 371 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 GCNT2Q8N0V5 402 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 ATP6V1C2Q8NEY4 427 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 FNDC9Q8TBE3 224 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 ELAC2Q9BQ52 826 aaKnown RBP12.98□□□□□ -0.33
RFX1-206ENST00000589760 SPATA9Q9BWV2 254 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 TIGARQ9NQ88 270 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 RLIMQ9NVW2 624 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 PRDM4Q9UKN5 801 aa12.98□□□□□ -0.33
RFX1-206ENST00000589760 LOC100653049A0A140TA62 436 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 GMNCA6NCL1 334 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 CFAP73A6NFT4 308 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 FAAHO00519 579 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 KRT34O76011 436 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 NPPAP01160 153 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 SHC1P29353 583 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 LSP1P33241 339 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 HTR3AP46098 478 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 CARD18P57730 90 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 MTPNP58546 118 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 EPS8Q12929 822 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 SELPLGQ14242 412 aa12.97□□□□□ -0.33
RFX1-206ENST00000589760 CAPRIN1Q14444 709 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms