RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 HHATLQ9HCP6 504 aa7.4□□□□□ -1.22
DNMT1-219ENST00000589349 UBQLN4Q9NRR5 601 aa7.4□□□□□ -1.22
DNMT1-219ENST00000589349 NDRG3Q9UGV2 375 aa7.4□□□□□ -1.22
DNMT1-219ENST00000589349 ATP6V1HQ9UI12 483 aa7.4□□□□□ -1.22
DNMT1-219ENST00000589349 L3MBTL1Q9Y468 752 aa7.4□□□□□ -1.22
DNMT1-219ENST00000589349 NCOA6Q14686 2063 aaPredicted RBP7.4□□□□□ -1.23
DNMT1-219ENST00000589349 FREM3P0C091 2139 aa7.4□□□□□ -1.23
DNMT1-219ENST00000589349 INTS1Q8N201 2190 aaKnown RBP7.4□□□□□ -1.23
DNMT1-219ENST00000589349 PHF3Q92576 2039 aaKnown RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 NBPF19A0A087WUL8 3843 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 OR2M5A3KFT3 312 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MBD3L4A6NDZ8 208 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MBD3L3A6NE82 208 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MBD3L5A6NJ08 208 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 H0YC42 278 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 BIRC5O15392 142 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TYROBPO43914 113 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 NKX2-2O95096 273 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 RCBTB2O95199 551 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 OXSR1O95747 527 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TGM6O95932 706 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TUBBP07437 444 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ZNF708P17019 499 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MATN1P21941 496 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 DNASE1P24855 282 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 SFTPDP35247 375 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 SLC16A1P53985 500 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 GAS1P54826 345 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TPD52P55327 224 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 CLDN18P56856 261 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 CLDN20P56880 219 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 DGCR2P98153 550 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 EMX2Q04743 252 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PON3Q15166 354 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 GPR68Q15743 365 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 UGT3A2Q3SY77 523 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PDSS1Q5T2R2 415 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ATAD3BQ5T9A4 648 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 OR4F3Q6IEY1 312 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ZCCHC12Q6PEW1 402 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 C16orf62Q7Z3J2 963 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ANKRD46Q86W74 232 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MREGQ8N565 214 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 NATD1Q8N6N6 113 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 FADS6Q8N9I5 356 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 OR5D16Q8NGK9 328 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 B4GALNT2Q8NHY0 566 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MBD3L2Q8NHZ7 208 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 FAM222BQ8WU58 562 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TFAP2CQ92754 450 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PGM2Q96G03 612 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ZC3HAV1LQ96H79 300 aaKnown RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ZNF845Q96IR2 970 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 SLC35G5Q96KT7 338 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 RNF145Q96MT1 663 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ZFP3Q96NJ6 502 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 ZBTB18Q99592 522 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 SLC39A3Q9BRY0 314 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TMEM109Q9BVC6 243 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 RTN4RQ9BZR6 473 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 KLHL4Q9C0H6 718 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PIGMQ9H3S5 423 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 CXorf36Q9H7Y0 433 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MANSC1Q9H8J5 431 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 TMEM140Q9NV12 185 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PNPOQ9NVS9 261 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 FBXO34Q9NWN3 711 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MARCOQ9UEW3 520 aaPredicted RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PACSIN3Q9UKS6 424 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MCTS1Q9ULC4 181 aaKnown RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 CLEC4AQ9UMR7 237 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 PLEKHA6Q9Y2H5 1048 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 MRPS18CQ9Y3D5 142 aaKnown RBP7.39□□□□□ -1.23
DNMT1-219ENST00000589349 RAP2CQ9Y3L5 183 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 SPEF1Q9Y4P9 236 aa7.39□□□□□ -1.23
DNMT1-219ENST00000589349 GOLGA8QA0A0J9YX86 632 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 RNF103-CHMP3A0A140T963 221 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 A0A1W2PNV4 684 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 GOLGA8OA6NCC3 632 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 A6NNC1 897 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 NPIPB8E9PQR5 432 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 GOLGA8NF8WBI6 632 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 TNFSF11O14788 317 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 TBX19O60806 448 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 POU2F1P14859 743 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 LBPP18428 481 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 TBXA2RP21731 343 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 ARRB2P32121 409 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 S100A3P33764 101 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 SUCLG1P53597 346 aaKnown RBP7.38□□□□□ -1.23
DNMT1-219ENST00000589349 CLDN8P56748 225 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 RIPPLY3P57055 190 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 EEF1A1P68104 462 aaKnown RBP7.38□□□□□ -1.23
DNMT1-219ENST00000589349 HPCAP84074 193 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 PDE7AQ13946 482 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 KEAP1Q14145 624 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 BCL2A1Q16548 175 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 XKR7Q5GH72 579 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 DCST2Q5T1A1 773 aa7.38□□□□□ -1.23
DNMT1-219ENST00000589349 ANXA8L1Q5VT79 327 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms