RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PRODH2	Q9UF12	536 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	CPSF4L	A6NMK7	179 aa	Known RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318		B4DXG7	233 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	PRKN	O60260	465 aa	Predicted RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZGLP1	P0C6A0	271 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	PRG2	P13727	222 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	CD59	P13987	128 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	POU2F1	P14859	743 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	RFX3	P48380	749 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	RNF144A	P50876	292 aa	Predicted RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	RPP38	P78345	283 aa	Known RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	SF3A2	Q15428	464 aa	Known RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	SMN1	Q16637	294 aa	Known RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	SLC35F1	Q5T1Q4	408 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	PGBD2	Q6P3X8	592 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	KLHL17	Q6TDP4	642 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318		Q6ZPB1	254 aa	Predicted RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	LANCL3	Q6ZV70	420 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	ENTHD1	Q8IYW4	607 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	BCORP1	Q8N888	145 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	APH1B	Q8WW43	257 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	GTPBP3	Q969Y2	492 aa	Known RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZC3HAV1L	Q96H79	300 aa	Known RBP	14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318		Q96MT0	163 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR8D2	Q9GZM6	311 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	RXFP3	Q9NSD7	469 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	TMCC3	Q9ULS5	477 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	CBLC	Q9ULV8	474 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	CLCA3P	Q9Y6N3	262 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318		V9GYH0	126 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	CFAP54	Q96N23	3096 aa		14.17	□□□□□ -0.14
DDX39A-209	ENST00000589318	TRIM77	I1YAP6	450 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	ADA	P00813	363 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	CHM	P24386	653 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	DCD	P81605	110 aa	Known RBP	14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	CD83	Q01151	205 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	RUNX1T1	Q06455	604 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	IL11RA	Q14626	422 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	IRF3	Q14653	427 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	ENTPD8	Q5MY95	495 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	PDZK1	Q5T2W1	519 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	LCN10	Q6JVE6	187 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	KIF18B	Q86Y91	864 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	CYP4Z2P	Q8N1L4	340 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	DEPDC4	Q8N2C3	294 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	YIPF7	Q8N8F6	280 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	C7orf57	Q8NEG2	295 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	NR4A3	Q92570	626 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	SLC46A1	Q96NT5	459 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	LMF1	Q96S06	567 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	MCHR1	Q99705	422 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	MESP1	Q9BRJ9	268 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	CHCHD6	Q9BRQ6	235 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	CENPO	Q9BU64	300 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	NUDT9	Q9BW91	350 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR51E2	Q9H255	320 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	CACYBP	Q9HB71	228 aa	Known RBP	14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	STUB1	Q9UNE7	303 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318	PCDHGA6	Q9Y5G7	932 aa		14.16	□□□□□ -0.14
DDX39A-209	ENST00000589318		A0A087WUU8	490 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	IQCM	A0A1B0GVH7	501 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	VSTM2B	A6NLU5	285 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	PLD2	O14939	933 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	SERPINI2	O75830	405 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	CYP7B1	O75881	506 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	CCNYL3	P0C7X3	344 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ADORA3	P0DMS8	318 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ENPP1	P22413	925 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	RORC	P51449	518 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	TAS2R41	P59536	307 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	MAB21L1	Q13394	359 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZNF141	Q15928	474 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	BTBD16	Q32M84	506 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZBTB37	Q5TC79	503 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	UTS2B	Q765I0	119 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	OVCH1	Q7RTY7	1134 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	AGBL5	Q8NDL9	886 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR4K5	Q8NGD3	323 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR14A16	Q8NHC5	309 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ADIPOR1	Q96A54	375 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	NXF5	Q9H1B4	397 aa	Known RBP	14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	TIGAR	Q9NQ88	270 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	PTTG3P	Q9NZH4	202 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	REV1	Q9UBZ9	1251 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	MGAT4B	Q9UQ53	548 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318		A0A1W2PQ09	198 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	OR10H3	O60404	316 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	NTN1	O95631	604 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	HBQ1	P09105	142 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	GKN3P	P0CG01	181 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	CCL4	P13236	92 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZNF28	P17035	718 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	DRD5	P21918	477 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	HTR2A	P28223	471 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	PPIC	P45877	212 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	TAB1	Q15750	504 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	ZER1	Q7Z7L7	766 aa		14.15	□□□□□ -0.14
DDX39A-209	ENST00000589318	C9orf40	Q8IXQ3	194 aa		14.15	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms