RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 TRIM46Q7Z4K8 759 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 WDR60Q8WVS4 1066 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 NEU4Q8WWR8 484 aaPredicted RBP18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 ACTRT3Q9BYD9 372 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 SAP130Q9H0E3 1048 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 PLK3Q9H4B4 646 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 LPAR2Q9HBW0 351 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 DYNLRB1Q9NP97 96 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 GRIP1Q9Y3R0 1128 aa18.95■□□□□ 0.62
CAPNS1-205ENST00000588780 SH3PXD2BA1X283 911 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 VSTM5A8MXK1 200 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 TSPO2Q5TGU0 170 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 ZCCHC24Q8N2G6 241 aaKnown RBP18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 SVOPLQ8N434 492 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 ZNF563Q8TA94 476 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 L3HYPDHQ96EM0 354 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 SLC38A2Q96QD8 506 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 FBXO9Q9UK97 447 aaPredicted RBP18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 SLC9A8Q9Y2E8 581 aa18.94■□□□□ 0.62
CAPNS1-205ENST00000588780 IGHV1-18A0A0C4DH31 117 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 SERINC4A6NH21 518 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 hCG_2039718K7EN88 272 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 PDLIM1O00151 329 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 KRT33AO76009 404 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 PDE5AO76074 875 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 PMS2P2O95744 297 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 KRT16P08779 473 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 SNRPAP09012 282 aaKnown RBP18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 UBTFL6P0CB48 400 aaPredicted RBP18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 CCNA2P20248 432 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 MPGP29372 298 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 SLC16A1P53985 500 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 EFNB3Q15768 340 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 DEF8Q6ZN54 512 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 ZNF786Q8N393 782 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 UBASH3BQ8TF42 649 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 ZNF764Q96H86 408 aaPredicted RBP18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 JMJD8Q96S16 334 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 LAT2Q9GZY6 243 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 GSTO2Q9H4Y5 243 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 NARFLQ9H6Q4 476 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 HIF1ANQ9NWT6 349 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 C1orf109Q9NX04 203 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 BAIAP2L1Q9UHR4 511 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 KCNE3Q9Y6H6 103 aa18.93■□□□□ 0.62
CAPNS1-205ENST00000588780 ESPNB1AK53 854 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 ETV2O00321 342 aaPredicted RBP18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 CSTAP01040 98 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 FRKP42685 505 aaPredicted RBP18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 UBE2NP61088 152 aaKnown RBP18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 GPR68Q15743 365 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 EXOSC6Q5RKV6 272 aaKnown RBP18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 PRR31Q5SQ13 230 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 C1QTNF12Q5T7M4 302 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 ARL5BQ96KC2 179 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 CCT7Q99832 543 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 KATNB1Q9BVA0 655 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 CTPS2Q9NRF8 586 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 ACER3Q9NUN7 267 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 CHRNA9Q9UGM1 479 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 HDGFL3Q9Y3E1 203 aa18.92■□□□□ 0.62
CAPNS1-205ENST00000588780 LYNX1G3V0Z9 82 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 TBX19O60806 448 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 LYNX1P0DP58 116 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 SDC1P18827 310 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 APOBEC1P41238 236 aaKnown RBP18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 CCT3P49368 545 aaKnown RBP18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 HILS1P60008 231 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 IL1RL1Q01638 556 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 SLC7A5Q01650 507 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 SKP2Q13309 424 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 ADRM1Q16186 407 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 AWAT1Q58HT5 328 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 SPATA21Q7Z572 469 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 OR56A1Q8NGH5 318 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 DCAKDQ8WVC6 231 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 TMEM186Q96B77 213 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 NAA11Q9BSU3 229 aaPredicted RBP18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 OR11A1Q9GZK7 315 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 SIRT3Q9NTG7 399 aaPredicted RBP18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 USP22Q9UPT9 525 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 PCDHGB1Q9Y5G3 927 aa18.91■□□□□ 0.62
CAPNS1-205ENST00000588780 NPIPB9F8W1W9 429 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 SLC28A1O00337 649 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 ANKRD28O15084 1053 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 RYKP34925 604 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 LIMS1P48059 325 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 KIAA0040Q15053 153 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 CFAP157Q5JU67 520 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 FAHD2BQ6P2I3 314 aaPredicted RBP18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 R3HCC1LQ7Z5L2 792 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 FAHD2AQ96GK7 314 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 METTL2AQ96IZ6 378 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 CDC42EP4Q9H3Q1 356 aaKnown RBP18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 OBP2BQ9NPH6 170 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 TMEM45AQ9NWC5 275 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 ZNF180Q9UJW8 692 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 FLVCR1Q9Y5Y0 555 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 PTGDR2Q9Y5Y4 395 aa18.9■□□□□ 0.62
CAPNS1-205ENST00000588780 TMPRSS2O15393 492 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms