RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 NTN1O95631 604 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 NUDT14O95848 222 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 SERPINA1P01009 418 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 GLI4P10075 376 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 NCK1P16333 377 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 CHMP24386 653 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 ACAA2P42765 397 aaKnown RBP13.41□□□□□ -0.26
HDAC5-207ENST00000588261 HTR3AP46098 478 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 MAP2K6P52564 334 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 RGS8P57771 180 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-207ENST00000588261 COPZ1P61923 177 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 NDUFAF6Q330K2 333 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 AAGABQ6PD74 315 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 SEM1Q6ZVN7 128 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 RANBP3LQ86VV4 465 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-207ENST00000588261 TMEM200AQ86VY9 491 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 DHFR2Q86XF0 187 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 LSMEM1Q8N8F7 131 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 OR14L1PQ8NHC6 308 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 NEIL3Q8TAT5 605 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
HDAC5-207ENST00000588261 RND1Q92730 232 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 TTYH2Q9BSA4 534 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 RSPO3Q9BXY4 272 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-207ENST00000588261 TRIM2Q9C040 744 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 PCDHAC1Q9H158 963 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 Q9UFV3 132 aa13.41□□□□□ -0.26
HDAC5-207ENST00000588261 TRGV5A0A0B4J1U4 118 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ACOT8O14734 319 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ZIC3O60481 467 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ADAM11O75078 769 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 CYP7B1O75881 506 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ACTL6AO96019 429 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 PRKCAP17252 672 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 HK1P19367 917 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
HDAC5-207ENST00000588261 SLC1A3P43003 542 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ZNF136P52737 540 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 GFRA1P56159 465 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 QPRTQ15274 297 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 TOMM20Q15388 145 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 IFI44LQ53G44 452 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 WBP2NLQ6ICG8 309 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ARSKQ6UWY0 536 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 GRINAQ7Z429 371 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ZNF563Q8TA94 476 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 CCDC124Q96CT7 223 aaKnown RBP13.4□□□□□ -0.26
HDAC5-207ENST00000588261 CLPTM1LQ96KA5 538 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 TMUB1Q9BVT8 246 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 C12orf10Q9HB07 376 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ACER3Q9NUN7 267 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 STOML1Q9UBI4 398 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 SLC7A8Q9UHI5 535 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 EDARQ9UNE0 448 aa13.4□□□□□ -0.26
HDAC5-207ENST00000588261 ACANP16112 2415 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 AQP12BA6NM10 295 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 ZNF682O95780 498 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 HOXD4P09016 255 aaPredicted RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 PSMA4P25789 261 aaKnown RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 ACVR2AP27037 513 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 APOBEC1P41238 236 aaKnown RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 RNF144AP50876 292 aaPredicted RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 B3GALT5-AS1P59052 145 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 SNTB1Q13884 538 aaKnown RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 ZSCAN26Q16670 478 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 RAET1LQ5VY80 246 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 ZNF585AQ6P3V2 769 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 AQP12AQ8IXF9 295 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 DNAJA4Q8WW22 397 aaPredicted RBP13.39□□□□□ -0.27
HDAC5-207ENST00000588261 SARAFQ96BY9 339 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 HSH2DQ96JZ2 352 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 LRGUKQ96M69 825 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 LDAHQ9H6V9 325 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 POMPQ9Y244 141 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 VDAC3Q9Y277 283 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 PCNX3Q9H6A9 2034 aa13.39□□□□□ -0.27
HDAC5-207ENST00000588261 AP3D1O14617 1153 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 IFNW1P05000 195 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 GKN3PP0CG01 181 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 ATP6V1B2P21281 511 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 DNAJA1P31689 397 aaKnown RBP13.38□□□□□ -0.27
HDAC5-207ENST00000588261 RYKP34925 604 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 MSX2P35548 267 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-207ENST00000588261 IDH2P48735 452 aaKnown RBP13.38□□□□□ -0.27
HDAC5-207ENST00000588261 SESN3P58005 492 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 MS4A2Q01362 244 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 FOXF1Q12946 379 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 SELENBP1Q13228 472 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 BCL2A1Q16548 175 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 WIPI1Q5MNZ9 446 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-207ENST00000588261 VASNQ6EMK4 673 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 ZNF613Q6PF04 617 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 ENPP6Q6UWR7 440 aa13.38□□□□□ -0.27
HDAC5-207ENST00000588261 YRDCQ86U90 279 aaKnown RBP13.38□□□□□ -0.27
HDAC5-207ENST00000588261 CARM1Q86X55 608 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms