RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 DEPPQ9NTK1 212 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 C1orf109Q9NX04 203 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 AHSPQ9NZD4 102 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 GIMAP2Q9UG22 337 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 CCL27Q9Y4X3 112 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 USH1CQ9Y6N9 552 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 FREM3P0C091 2139 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 MTORP42345 2549 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 DCHS2Q6V1P9 2916 aa4.28□□□□□ -1.72
RPRD1A-205ENST00000587563 PRRC2AP48634 2157 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 NCOA6Q14686 2063 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 IGKV3D-11A0A0A0MRZ8 115 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 A0A0A6YYD5 115 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GOLGA8QA0A0J9YX86 632 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 A0A1B0GUH1 482 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GOLGA8OA6NCC3 632 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ASPDHA6ND91 283 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 TRPC5OSA6NMA1 111 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ENO4A6NNW6 628 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 WASHC1A8K0Z3 465 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GOLGA8NF8WBI6 632 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PSMD12O00232 456 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 SDHDO14521 159 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 LSM1O15116 133 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 HDAC3O15379 428 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 TMPRSS11DO60235 418 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PCDH7O60245 1069 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 DIAPH2O60879 1101 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RSL1D1O76021 490 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PDE9AO76083 593 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 MYO1DO94832 1006 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 SEMA3DO95025 777 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 FHP07954 510 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 SP1P08047 785 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ANXA4P09525 319 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RNH1P13489 461 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CPN2P22792 545 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PSMA4P25789 261 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ABCD3P28288 659 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 EPHA3P29320 983 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 TIA1P31483 386 aaKnown RBP eCLIP4.27□□□□□ -1.737e-7■■■■□ 20.1
RPRD1A-205ENST00000587563 PGM1P36871 562 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ARFIP1P53367 373 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 MAPK12P53778 367 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 LIM2P55344 173 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 OR4D2P58180 307 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RPL38P63173 70 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GNGT1P63211 74 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RAE1P78406 368 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CBX1P83916 185 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 OC90Q02509 493 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 SF3A3Q12874 501 aaKnown RBP eCLIP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ART3Q13508 389 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 LARS2Q15031 903 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 KIAA0040Q15053 153 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 NSDHLQ15738 373 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ZNF630Q2M218 657 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GALNTL6Q49A17 601 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ATP6AP1LQ52LC2 224 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RFTN2Q52LD8 501 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 SPIN4Q56A73 249 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 XKR7Q5GH72 579 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 C6orf136Q5SQH8 315 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ACSM2BQ68CK6 577 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ABLIM2Q6H8Q1 611 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 NOXRED1Q6NXP6 359 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CYP20A1Q6UW02 462 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 DGAT2L6Q6ZPD8 337 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RNF165Q6ZSG1 346 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PAGE2Q7Z2X7 111 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GPR180Q86V85 440 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 NUDT13Q86X67 352 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CCDC71Q8IV32 467 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PEX5LQ8IYB4 626 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 LRRC34Q8IZ02 419 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ZCCHC7Q8N3Z6 543 aaKnown RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 FAM47BQ8NA70 645 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 APCDD1LQ8NCL9 501 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 RFWD2Q8NHY2 731 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CDC26Q8NHZ8 85 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ELP5Q8TE02 316 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 C16orf78Q8WTQ4 265 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 TM4SF18Q96CE8 201 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 PPP3R2Q96LZ3 170 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 GPR137Q96N19 417 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CSF3RQ99062 836 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CCT7Q99832 543 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 MAPKAP1Q9BPZ7 522 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 TUBB6Q9BUF5 446 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 NPLQ9BXD5 320 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 EBPLQ9BY08 206 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 ZNF717Q9BY31 904 aaPredicted RBP4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 UCK2Q9BZX2 261 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 CCDC134Q9H6E4 229 aa4.27□□□□□ -1.73
RPRD1A-205ENST00000587563 MEAF6Q9HAF1 191 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms