RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 RAB7BQ96AH8 199 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 RPUSD4Q96CM3 377 aaKnown RBP2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 PGLYRP4Q96LB8 373 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 KCNA7Q96RP8 456 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 SPXQ9BT56 116 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 GPR61Q9BZJ8 451 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 B3GNT2Q9NY97 397 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 RBAKQ9NYW8 714 aaPredicted RBP2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 NINJ2Q9NZG7 142 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 CTNNA3Q9UI47 895 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 SCN2AQ99250 2005 aa2.39□□□□□ -2.03
CACNA1A-208ENST00000587451 IGHV3OR16-13A0A075B7E8 117 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 RRASP10301 218 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 SFTPCP11686 197 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 SULT1E1P49888 294 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 SELENOTP62341 195 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 HTD2P86397 168 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 CSTF1Q05048 431 aaKnown RBP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 FUT7Q11130 342 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 TMED1Q13445 227 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 NRF1Q16656 503 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 PIGGQ5H8A4 983 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 CCDC183Q5T5S1 534 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 OR6B2Q6IFH4 312 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 OR51S1Q8NGJ8 323 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 ZNF596Q8TC21 504 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 M1APQ8TC57 530 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 BRSK1Q8TDC3 778 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 CTNNBL1Q8WYA6 563 aaPredicted RBP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 HIST1H4GQ99525 98 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 GAL3ST1Q99999 423 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 RIOK1Q9BRS2 568 aaKnown RBP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 HDHD3Q9BSH5 251 aaPredicted RBP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 TPK1Q9H3S4 243 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 ANO10Q9NW15 660 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 AATFQ9NY61 560 aaKnown RBP eCLIP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 TAS2R3Q9NYW6 316 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 WARS2Q9UGM6 360 aaKnown RBP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 ANGPTL2Q9UKU9 493 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 PIN4Q9Y237 131 aaKnown RBP2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 ATP8B3O60423 1300 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 MAP3K15Q6ZN16 1313 aa2.38□□□□□ -2.03
CACNA1A-208ENST00000587451 E7ESA3 106 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 UBXN8O00124 270 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 AP3B1O00203 1094 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 HCRTR1O43613 425 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 DUX1O43812 170 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 NOL3O60936 208 aaKnown RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 GZMAP12544 262 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 ICAM2P13598 275 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 ADSSP30520 456 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 IFNAR2P48551 515 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CAMLGP49069 296 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 HNMTP50135 292 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 NAPAP54920 295 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 STARD6P59095 220 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 GABPB1Q06547 395 aaPredicted RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 DMTNQ08495 405 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 PDK1Q15118 436 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CHI3L2Q15782 390 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 TMEM52BQ4KMG9 183 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CEP55Q53EZ4 464 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 HSP90AB3PQ58FF7 597 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 FAM199XQ6PEV8 388 aaPredicted RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 C16orf62Q7Z3J2 963 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 RABEPKQ7Z6M1 372 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 TMEM17Q86X19 198 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 FAM71CQ8NEG0 241 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 OR5AU1Q8NGC0 362 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 PHF10Q8WUB8 498 aaKnown RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 TCTEX1D2Q8WW35 142 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 TMEM158Q8WZ71 300 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 ZNF75CPQ92670 426 aaPredicted RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CEP170P1Q96L14 293 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 TCEANC2Q96MN5 208 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CRACR2AQ9BSW2 395 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 SPATA16Q9BXB7 569 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 OR11A1Q9GZK7 315 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 NAT10Q9H0A0 1025 aaKnown RBP2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 VPS37BQ9H9H4 285 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 CALHM2Q9HA72 323 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 LHX9Q9NQ69 397 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 HOXC10Q9NYD6 342 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 ANAPC7Q9UJX3 599 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 KIF3AQ9Y496 699 aa2.37□□□□□ -2.03
CACNA1A-208ENST00000587451 PDS5BQ9NTI5 1447 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 RNF103-CHMP3A0A140T963 221 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 CLRN2A0PK11 232 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 FAM25EA8MYX2 175 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 H0YC42 278 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 PEX11AO75192 247 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 ADCY5O95622 1261 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 GNA14O95837 355 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 CYLC1P35663 651 aaPredicted RBP2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 SSR1P43307 286 aaKnown RBP2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 RAB40BQ12829 278 aa2.36□□□□□ -2.03
CACNA1A-208ENST00000587451 MOBPQ13875 183 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms