RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 THSD4Q6ZMP0 1018 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 ESX1Q8N693 406 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 SLC15A4Q8N697 577 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 DEFB124Q8NES8 71 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 TNFRSF13CQ96RJ3 184 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 IFT27Q9BW83 186 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 ZNF160Q9HCG1 818 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 WARS2Q9UGM6 360 aaKnown RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 SNTNA6NMZ2 147 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 ADAM10O14672 748 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 MAN1A2O60476 641 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 CDC40O60508 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRIM47-204ENST00000587339 FBXO45P0C2W1 286 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 OTX2P32243 289 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 GP2P55259 537 aaKnown RBP18.09■□□□□ 0.49
TRIM47-204ENST00000587339 TBCEQ15813 527 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-204ENST00000587339 COL28A1Q2UY09 1125 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 LNX2Q8N448 690 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 ANKK1Q8NFD2 765 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 ISOC1Q96CN7 298 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 GALNT9Q9HCQ5 603 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 KLRF1Q9NZS2 232 aa18.09■□□□□ 0.49
TRIM47-204ENST00000587339 LRRN3E7EW58 273 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 PRODHO43272 600 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 FOXD2O60548 495 aaPredicted RBP18.08■□□□□ 0.49
TRIM47-204ENST00000587339 ITGA10O75578 1167 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 IGF2P01344 180 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 GP1BBP13224 206 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 DCKP27707 260 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 SLC9A3P48764 834 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 SSPNQ14714 243 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 OR5M10Q6IEU7 315 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 OR10G3Q8NGC4 313 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 ZNF420Q8TAQ5 688 aaPredicted RBP18.08■□□□□ 0.49
TRIM47-204ENST00000587339 SPACA9Q96E40 222 aaPredicted RBP18.08■□□□□ 0.49
TRIM47-204ENST00000587339 LRFN3Q9BTN0 628 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 MCCC2Q9HCC0 563 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 COMMD3-BMI1R4GMX3 469 aa18.08■□□□□ 0.49
TRIM47-204ENST00000587339 C2orf72A6NCS6 295 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 ZNF701M0R085 212 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-204ENST00000587339 CXCR1P25024 350 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 GSTT1P30711 240 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 GRK5P34947 590 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 FHL1Q13642 323 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 QPRTQ15274 297 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 NTRK2Q16620 822 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 SYT6Q5T7P8 510 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-204ENST00000587339 PPP1R32Q7Z5V6 425 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 SLC43A2Q8N370 569 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 LRRC17Q8N6Y2 441 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 GPR119Q8TDV5 335 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 FCGR1BQ92637 280 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 CXorf56Q9H5V9 222 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 OSGIN1Q9UJX0 560 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 ZNF337Q9Y3M9 751 aa18.08■□□□□ 0.48
TRIM47-204ENST00000587339 OR7A10O76100 309 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 TNFSF15O95150 251 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 SLC2A10O95528 541 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 LCKP06239 509 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 PSMB9P28065 219 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 SLC6A6P31641 620 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 EGR4Q05215 589 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 SLC35F1Q5T1Q4 408 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 POMZP3Q6PJE2 187 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 SLC46A3Q7Z3Q1 461 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 NLGN4YQ8NFZ3 816 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-204ENST00000587339 RNF138Q8WVD3 245 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 RFKQ969G6 155 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 CDCA4Q9BXL8 241 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 METTL7AQ9H8H3 244 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 TAS2R10Q9NYW0 307 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRIM47-204ENST00000587339 PCNX2A6NKB5 2137 aa18.07■□□□□ 0.48
TRIM47-204ENST00000587339 KDM4EB2RXH2 506 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 NDUFB2O95178 105 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 CCNA2P20248 432 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 SOX3P41225 446 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 NBL1P41271 181 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 ST13P50502 369 aaKnown RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 FOXK2Q01167 660 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 TMEM44Q2T9K0 475 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 UBE2UQ5VVX9 321 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 BICRALQ6AI39 1079 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 C10orf53Q8N6V4 93 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 NACC2Q96BF6 587 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 COL25A1Q9BXS0 654 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 BAIAP2Q9UQB8 552 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 YARS2Q9Y2Z4 477 aaKnown RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 EXPH5Q8NEV8 1989 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 EP300Q09472 2414 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 DKK1O94907 266 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 ICAM2P13598 275 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 NOS3P29474 1203 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 GAS1P54826 345 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 ZNF74Q16587 644 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 ZNF791Q3KP31 576 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 AADACL4Q5VUY2 407 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 NXNL2Q5VZ03 156 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 B3GNT6Q6ZMB0 384 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 GRINAQ7Z429 371 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms