RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 EFNA2O43921 213 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 TIPRLO75663 272 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 KRT36O76013 467 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 CST1P01037 141 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 IL11P20809 199 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 RRM2P31350 389 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 RBM34P42696 430 aaKnown RBP15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 RAC1P63000 192 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 SPIBQ01892 262 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 GK3PQ14409 553 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 VASNQ6EMK4 673 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 WDR88Q6ZMY6 472 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 GHDCQ8N2G8 530 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 TMEM43Q9BTV4 400 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 S100A14Q9HCY8 104 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 ASF1BQ9NVP2 202 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 STOML1Q9UBI4 398 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 DNAJB9Q9UBS3 223 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 SLC6A5Q9Y345 797 aa15.31■□□□□ 0.04
PRKCSH-203ENST00000586486 TMEM72A0PK05 275 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 DEAF1O75398 565 aaPredicted RBP15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 WISP2O76076 250 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 GADD45GO95257 159 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 FUT4P22083 530 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 LIMS1P48059 325 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 CLK1P49759 484 aaKnown RBP15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 HMGA2P52926 109 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 CRYZQ08257 329 aaKnown RBP15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 ATP6AP1Q15904 470 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 BCL2A1Q16548 175 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 ARHGAP11AQ6P4F7 1023 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 POMZP3Q6PJE2 187 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 C5orf46Q6UWT4 87 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 NKAIN4Q8IVV8 208 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 STK35Q8TDR2 534 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 HS6ST2Q96MM7 605 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 FUZQ9BT04 418 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 SLC19A3Q9BZV2 496 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 EXO5Q9H790 373 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 SPRR3Q9UBC9 169 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 LYVE1Q9Y5Y7 322 aa15.3■□□□□ 0.04
PRKCSH-203ENST00000586486 IGKV1D-42A0A075B6H8 117 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 OR14I1A6ND48 311 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 GJE1A6NN92 205 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 A8MVM7 634 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 H3BML4 177 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 CLOCKO15516 846 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 NPIPB7O75200 414 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 PEPDP12955 493 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 BMP7P18075 431 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 POU3F2P20265 443 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 FASP25445 335 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 LHX2P50458 406 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 SYT14P1Q58G82 188 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 LILRA2Q8N149 483 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 RNF217Q8TC41 542 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 SLC7A13Q8TCU3 470 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 ACOT11Q8WXI4 607 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 ABTB1Q969K4 478 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 DDIT4LQ96D03 193 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 BBC3Q96PG8 261 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 REEP1Q9H902 201 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 DNAJC13O75165 2243 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 PRRC2CQ9Y520 2896 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 COL6A6A6NMZ7 2263 aa15.29■□□□□ 0.04
PRKCSH-203ENST00000586486 LDLRP01130 860 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 ZNF708P17019 499 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 EGR4Q05215 589 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 FGD3Q5JSP0 725 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 DCST1Q5T197 706 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 GGNQ86UU5 652 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 OR4C15Q8NGM1 316 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 TMEM255BQ8WV15 326 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 TMEM239Q8WW34 195 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 EPYCQ99645 322 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 VNN3Q9NY84 501 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 SAMHD1Q9Y3Z3 626 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 MED12Q93074 2177 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 MPDZO75970 2070 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 ZFYVE26Q68DK2 2539 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 TRBV4-1A0A0J9YWV2 114 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 H0YHG0 523 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 IGF2P01344 180 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 EDN3P14138 238 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 CCNA2P20248 432 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 CLDN18P56856 261 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 TTC33Q6PID6 262 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 CHERPQ8IWX8 916 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 RNF113BQ8IZP6 322 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 CPT1CQ8TCG5 803 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 SARAFQ96BY9 339 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 KLHL15Q96M94 604 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 POTEKPQ9BYX7 375 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 TMEM185BQ9H7F4 350 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 HDGFL3Q9Y3E1 203 aa15.28■□□□□ 0.04
PRKCSH-203ENST00000586486 A0A087WUU8 490 aa15.27■□□□□ 0.03
PRKCSH-203ENST00000586486 A0A1B0GTH9 108 aa15.27■□□□□ 0.03
PRKCSH-203ENST00000586486 ZC3H12DA2A288 527 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms