RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 ATP6V1E1P36543 226 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ETV5P41161 510 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ETV1P50549 477 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 SLC26A5P58743 744 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ISXQ2M1V0 245 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ZNF829Q3KNS6 432 aaPredicted RBP12.97□□□□□ -0.33
LIG3-205ENST00000585941 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 CBLN3Q6UW01 205 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 DPY19L2P2Q6ZN68 376 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ADCK1Q86TW2 530 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ATCAYQ86WG3 371 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 AMER2Q8N7J2 671 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 OR5W2Q8NH69 310 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ENKD1Q9H0I2 346 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 ARRDC1-AS1Q9H2J1 176 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 APMAPQ9HDC9 416 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 A3GALT2U3KPV4 340 aa12.97□□□□□ -0.33
LIG3-205ENST00000585941 EXPH5Q8NEV8 1989 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 SLC2A10O95528 541 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
LIG3-205ENST00000585941 CPEP16870 476 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 PSMA1P25786 263 aaKnown RBP12.96□□□□□ -0.33
LIG3-205ENST00000585941 CCKBRP32239 447 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 EVI2BP34910 448 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 LIMK1P53667 647 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 ZNF117Q03924 483 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 FHL1Q13642 323 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 CBFBQ13951 182 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 LPAL2Q16609 132 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 S100ZQ8WXG8 99 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 BORCS5Q969J3 196 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 DTNBP1Q96EV8 351 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 SIAEQ9HAT2 523 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 INPP5EQ9NRR6 644 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 NDUFB11Q9NX14 153 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 TNFRSF10DQ9UBN6 386 aa12.96□□□□□ -0.33
LIG3-205ENST00000585941 IGKV1D-42A0A075B6H8 117 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 IGHV3-20A0A0C4DH32 117 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 B4E171 279 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 C9J4A7 227 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 GNB5O14775 395 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 ARPC3O15145 178 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 PPP1R3DO95685 299 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 CD63P08962 238 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 INHBBP09529 407 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 GP1BBP13224 206 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 AVPR2P30518 371 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 TSPAN7P41732 249 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 TMED10P49755 219 aaKnown RBP12.96□□□□□ -0.34
LIG3-205ENST00000585941 P2RX1P51575 399 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.34
LIG3-205ENST00000585941 ITGADQ13349 1161 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 SSX1Q16384 188 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 SLC35F1Q5T1Q4 408 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 MARCH3Q86UD3 253 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 OR52N1Q8NH53 320 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 RHBDD1Q8TEB9 315 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 TTC9Q92623 222 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 OTULINQ96BN8 352 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 TMCO6Q96DC7 493 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 DACH2Q96NX9 599 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 GPX7Q96SL4 187 aaPredicted RBP12.96□□□□□ -0.34
LIG3-205ENST00000585941 WDR77Q9BQA1 342 aaPredicted RBP12.96□□□□□ -0.34
LIG3-205ENST00000585941 CHCHD6Q9BRQ6 235 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 OR51E2Q9H255 320 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 PALMDQ9NP74 551 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 HAO2Q9NYQ3 351 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 CCDC59Q9P031 241 aaKnown RBP12.96□□□□□ -0.34
LIG3-205ENST00000585941 CHRNA9Q9UGM1 479 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 SLC6A5Q9Y345 797 aa12.96□□□□□ -0.34
LIG3-205ENST00000585941 TRBV11-1A0A0K0K1C0 115 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 LOC100506127A0A0U1RQW1 187 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 SOCS6O14544 535 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ZFAND5O76080 213 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 TSPAN19P0C672 248 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 LIMS3P0CW19 117 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 LIMS4P0CW20 117 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
LIG3-205ENST00000585941 CXCR1P25024 350 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ITPKBP27987 946 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 TACR3P29371 465 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ACSM1Q08AH1 577 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 POU4F2Q12837 409 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ZNF74Q16587 644 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 KLHL36Q8N4N3 616 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ACBD7Q8N6N7 88 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 SLC37A3Q8NCC5 494 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 BBS1Q8NFJ9 593 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 OR5M3Q8NGP4 307 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ERMAPQ96PL5 475 aaPredicted RBP12.95□□□□□ -0.34
LIG3-205ENST00000585941 CTRCQ99895 268 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 ZBTB20Q9HC78 741 aaPredicted RBP12.95□□□□□ -0.34
LIG3-205ENST00000585941 HMG20AQ9NP66 347 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 NANSQ9NR45 359 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 WDR70Q9NW82 654 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
LIG3-205ENST00000585941 MPDZO75970 2070 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms