RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 C10orf105Q8TEF2 133 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 SLC25A43Q8WUT9 341 aaPredicted RBP12.71□□□□□ -0.37
SDF2-202ENST00000585428 PROX1Q92786 737 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 APH1AQ96BI3 265 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ZG16BQ96DA0 208 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ARL5BQ96KC2 179 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 INPP5KQ9BT40 448 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 C1orf50Q9BV19 199 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 DUSP26Q9BV47 211 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 BEX2Q9BXY8 128 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ZNF350Q9GZX5 532 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ASB6Q9NWX5 421 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 MKS1Q9NXB0 559 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 TAS2R16Q9NYV7 291 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 MALT1Q9UDY8 824 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 ZDHHC2Q9UIJ5 367 aa12.71□□□□□ -0.37
SDF2-202ENST00000585428 A0A1W2PR80 420 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 CCT8L1PA6NM43 557 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 GPR171O14626 319 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 BCAS1O75363 584 aaPredicted RBP12.7□□□□□ -0.38
SDF2-202ENST00000585428 NUDT7P0C024 238 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
SDF2-202ENST00000585428 CLDN8P56748 225 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 CHRNEQ04844 493 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 CLEC4FQ8N1N0 589 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 DEPDC4Q8N2C3 294 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 FNDC5Q8NAU1 212 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 EPS8L3Q8TE67 593 aaKnown RBP12.7□□□□□ -0.38
SDF2-202ENST00000585428 OIT3Q8WWZ8 545 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 FAM168AQ92567 244 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 MECRQ9BV79 373 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 C1QTNF6Q9BXI9 259 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 AMBRA1Q9C0C7 1298 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 CTPS2Q9NRF8 586 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 CHRNA9Q9UGM1 479 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 POU2F3Q9UKI9 436 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 TRAPPC4Q9Y296 219 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 HDGFL3Q9Y3E1 203 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 ALPK2Q86TB3 2170 aa12.7□□□□□ -0.38
SDF2-202ENST00000585428 SMIM23A6NLE4 172 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 ANKRD28O15084 1053 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 DNPH1O43598 174 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 SCN2BO60939 215 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 MRPL33O75394 65 aaKnown RBP12.69□□□□□ -0.38
SDF2-202ENST00000585428 ITGA5P08648 1049 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 IGHV4-31P0DP07 118 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 TFPIP10646 304 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 G6PDP11413 515 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 APOBEC3AP31941 199 aaPredicted RBP12.69□□□□□ -0.38
SDF2-202ENST00000585428 EFNA4P52798 201 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 EMX2Q04743 252 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 MST1LQ2TV78 715 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 C1QTNF12Q5T7M4 302 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
SDF2-202ENST00000585428 CLECL1Q8IZS7 167 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 PIGXQ8TBF5 258 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 AGR3Q8TD06 166 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 UBLCP1Q8WVY7 318 aaPredicted RBP12.69□□□□□ -0.38
SDF2-202ENST00000585428 SLC17A7Q9P2U7 560 aa12.69□□□□□ -0.38
SDF2-202ENST00000585428 VWC2LB2RUY7 222 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 M0R1B8 84 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 RNASET2O00584 256 aaKnown RBP12.68□□□□□ -0.38
SDF2-202ENST00000585428 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
SDF2-202ENST00000585428 SERPINB5P36952 375 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 CASP9P55211 416 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
SDF2-202ENST00000585428 PLAURQ03405 335 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 SWI5Q1ZZU3 235 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 PGS1Q32NB8 556 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 KRTAP24-1Q3LI83 254 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 TYW3Q6IPR3 259 aaKnown RBP12.68□□□□□ -0.38
SDF2-202ENST00000585428 GRINAQ7Z429 371 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 OR52E4Q8NGH9 312 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 XAGE5Q8WWM1 108 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 BOD1Q96IK1 185 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 OR11A1Q9GZK7 315 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 MANSC1Q9H8J5 431 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 POLE3Q9NRF9 147 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 EXD2Q9NVH0 621 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 LPAR3Q9UBY5 353 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 DCTN4Q9UJW0 460 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 SLC35A3Q9Y2D2 325 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 SPIN1Q9Y657 262 aaPredicted RBP12.68□□□□□ -0.38
SDF2-202ENST00000585428 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
SDF2-202ENST00000585428 KIAA0513O60268 411 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 LMX1BO60663 402 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 AGR2O95994 175 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 OR12D1P0DN82 309 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 BMP4P12644 408 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 MAGEA8P43361 318 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 PHC1P78364 1004 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 KCNJ10P78508 379 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 CHRNB3Q05901 458 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 SLC17A1Q14916 467 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 SMU1Q2TAY7 513 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms