RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 C1orf185Q5T7R7 199 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 Q6ZPB1 254 aaPredicted RBP12.5□□□□□ -0.41
TRAF4-215ENST00000584944 ESPNLQ6ZVH7 1005 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 DOLPP1Q86YN1 238 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 MCEMP1Q8IX19 187 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 POP5Q969H6 163 aaKnown RBP12.5□□□□□ -0.41
TRAF4-215ENST00000584944 RELTQ969Z4 430 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 SLC47A1Q96FL8 570 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 HSH2DQ96JZ2 352 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 KLHL15Q96M94 604 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 PRDM14Q9GZV8 571 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 TMED7Q9Y3B3 224 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 V9GYQ6 96 aa12.5□□□□□ -0.41
TRAF4-215ENST00000584944 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
TRAF4-215ENST00000584944 B4DXG7 233 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 E9PLN8 166 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 TNFSF11O14788 317 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 FMO6PO60774 539 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 CIB2O75838 187 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 PLGP00747 810 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-215ENST00000584944 FCGR2AP12318 317 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 GTF2E2P29084 291 aaKnown RBP12.49□□□□□ -0.41
TRAF4-215ENST00000584944 OR1E2P47887 323 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 SMSP52788 366 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 CLDN18P56856 261 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 CLDN20P56880 219 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 CSNK2A1P68400 391 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-215ENST00000584944 TRIM25Q14258 630 aaKnown RBP12.49□□□□□ -0.41
TRAF4-215ENST00000584944 OR1Q1Q15612 314 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 NRF1Q16656 503 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 TMEM44Q2T9K0 475 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 SYT14P1Q58G82 188 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 SLC25A53Q5H9E4 307 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 MTX3Q5HYI7 312 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 DCST1Q5T197 706 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 FGD2Q7Z6J4 655 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 OR2V1Q8NHB1 315 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 WDYHV1Q96HA8 205 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 ARHGDIGQ99819 225 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 VKORC1Q9BQB6 163 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 PCDHAC1Q9H158 963 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 GORASP2Q9H8Y8 452 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 COQ3Q9NZJ6 369 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 C6orf203Q9P0P8 240 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-215ENST00000584944 ACTR3BQ9P1U1 418 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 CD300AQ9UGN4 299 aa12.49□□□□□ -0.41
TRAF4-215ENST00000584944 A0A1B0GWA3 101 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 TRAPPC13A5PLN9 417 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 SULT2B1O00204 365 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 IL2RAP01589 272 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 ITGA2P17301 1181 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 CLK1P49759 484 aaKnown RBP12.48□□□□□ -0.41
TRAF4-215ENST00000584944 PMPCAQ10713 525 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 FOXD4Q12950 439 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-215ENST00000584944 ENTPD8Q5MY95 495 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 GTF2IRD2BQ6EKJ0 949 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF613Q6PF04 617 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 CYP2R1Q6VVX0 501 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 CBLL1Q75N03 491 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 GTF2IRD2Q86UP8 949 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 C10orf53Q8N6V4 93 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 LSMEM1Q8N8F7 131 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 GPR32P1Q8NGA4 272 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 OR6T1Q8NGN1 323 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 POC1BQ8TC44 478 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 RND1Q92730 232 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 ASB9Q96DX5 294 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 EPYCQ99645 322 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 KLHDC3Q9BQ90 382 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 TUBA1CQ9BQE3 449 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 TAPBPLQ9BX59 468 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 MMADHCQ9H3L0 296 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-215ENST00000584944 DCAF13Q9NV06 445 aaKnown RBP12.48□□□□□ -0.41
TRAF4-215ENST00000584944 OSGIN1Q9UJX0 560 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 MEMO1Q9Y316 297 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 LRBAP50851 2863 aa12.48□□□□□ -0.41
TRAF4-215ENST00000584944 CLCA1A8K7I4 914 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 A8MVM7 634 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF208O43345 1280 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 ADAM11O75078 769 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 PRKD3O94806 890 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 AHSA1O95433 338 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 NTN1O95631 604 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 TNFRSF1BP20333 461 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 IL11P20809 199 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF136P52737 540 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 FLOT2Q14254 428 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-215ENST00000584944 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
TRAF4-215ENST00000584944 OR2A2Q6IF42 318 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 C6orf89Q6UWU4 347 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms