RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	EMB	Q6PCB8	327 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	FAM71C	Q8NEG0	241 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	OR8J2	Q8NGG1	315 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	OR52E4	Q8NGH9	312 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	MIPOL1	Q8TD10	442 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	APH1A	Q96BI3	265 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ZHX1-C8orf76	Q96EF9	292 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	USB1	Q9BQ65	265 aa	Known RBP	10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SLC35A5	Q9BS91	424 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CACNG6	Q9BXT2	260 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	NUF2	Q9BZD4	464 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ASIC5	Q9NY37	505 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	B3GALT5	Q9Y2C3	310 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SLC35A3	Q9Y2D2	325 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	RTTN	Q86VV8	2226 aa		10.25	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	IGHV4-30-2	A0A087WSY4	118 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	IGKV3D-15	A0A087WSY6	115 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PRSS51	A0A1B0GVH4	220 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PRAMEF27	A3QJZ7	478 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114		E7EQL1	145 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114		M0R1B8	84 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	GPRIN2	O60269	458 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SCN2B	O60939	215 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PGM3	O95394	542 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SERPINE1	P05121	402 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	APOBEC1	P41238	236 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	IDH2	P48735	452 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	NUDT6	P53370	316 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	IRX1	P78414	480 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	HPCA	P84074	193 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SYPL1	Q16563	259 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	KRT71	Q3SY84	523 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	FAM174B	Q3ZCQ3	159 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SAXO2	Q658L1	398 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SLC22A25	Q6T423	547 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CASP12	Q6UXS9	341 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	B3GLCT	Q6Y288	498 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	GRINA	Q7Z429	371 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	DTX2	Q86UW9	622 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ADGRG3	Q86Y34	549 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ARFGAP2	Q8N6H7	521 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ANKFN1	Q8N957	763 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PIGX	Q8TBF5	258 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	AEN	Q8WTP8	325 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CNOT9	Q92600	299 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	REPIN1	Q9BWE0	567 aa	Known RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	FAIM	Q9NVQ4	179 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ASB6	Q9NWX5	421 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	MARCO	Q9UEW3	520 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SPIN1	Q9Y657	262 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114		V9GYY5	206 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ALPK2	Q86TB3	2170 aa		10.24	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ABCA1	O95477	2261 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	TMEM72	A0PK05	275 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	HMGN4	O00479	90 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CD5L	O43866	347 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	MRPL33	O75394	65 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PMS2P2	O95744	297 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	AGR2	O95994	175 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	THBS1	P07996	1170 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CHRM4	P08173	479 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ITGA5	P08648	1049 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	MYZAP	P0CAP1	466 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	BGN	P21810	368 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CD40	P25942	277 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SLC1A6	P48664	564 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	RPL14	P50914	215 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	FABP6	P51161	128 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	KCNJ10	P78508	379 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	CASP8	Q14790	479 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PDK3	Q15120	406 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SMU1	Q2TAY7	513 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ANXA8L1	Q5VT79	327 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	AGAP6	Q5VW22	663 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	HMBOX1	Q6NT76	420 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	TMEM108	Q6UXF1	575 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	P2RY8	Q86VZ1	359 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	RNF130	Q86XS8	419 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	VPS37A	Q8NEZ2	397 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PNPT1	Q8TCS8	783 aa	Known RBP	10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	NEURL3	Q96EH8	262 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	TEX37	Q96LM6	180 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SORT1	Q99523	831 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	RHNO1	Q9BSD3	238 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	INPP5K	Q9BT40	448 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	BARX1	Q9HBU1	254 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	PNPO	Q9NVS9	261 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	TAS2R16	Q9NYV7	291 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	HDGFL3	Q9Y3E1	203 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	RAP2C	Q9Y3L5	183 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	SLC25A15	Q9Y619	301 aa		10.23	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.22	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	ZC3H12D	A2A288	527 aa	Known RBP	10.22	□□□□□ -0.77
CDK5RAP3-223	ENST00000582114	FAM234B	A2RU67	622 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms