RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 POTEKPQ9BYX7 375 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 C12orf10Q9HB07 376 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 KCNN3Q9UGI6 736 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 ING1Q9UK53 422 aaPredicted RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 PACSIN3Q9UKS6 424 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 SPIN1Q9Y657 262 aaPredicted RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 CAPN7Q9Y6W3 813 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 MAST4O15021 2626 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 LRBAP50851 2863 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 TMED7-TICAM2A0A0A6YYA0 188 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 PRORSD1PA6NEY8 169 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 MRASO14807 208 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 TPST1O60507 370 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 CYTIPO60759 359 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 NPIPB7O75200 414 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 SYNGR4O95473 234 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 GKN3PP0CG01 181 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 PRG2P13727 222 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 UQCRBP14927 111 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 MTPNP58546 118 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 VEZF1Q14119 521 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 RNPS1Q15287 305 aaKnown RBP11.28□□□□□ -0.6
SNORD55-201ENST00000581525 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
SNORD55-201ENST00000581525 C6orf89Q6UWU4 347 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 HACD2Q6Y1H2 254 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
SNORD55-201ENST00000581525 SNX32Q86XE0 403 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 TREML1Q86YW5 311 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 OR6K3Q8NGY3 331 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 ARL5BQ96KC2 179 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 TMEM185BQ9H7F4 350 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 BCO1Q9HAY6 547 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 GID8Q9NWU2 228 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 TMED7Q9Y3B3 224 aa11.28□□□□□ -0.6
SNORD55-201ENST00000581525 IGKV3D-15A0A087WSY6 115 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 A0A1W2PNR3 127 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 TMEM229AB2RXF0 380 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 SERPINB7O75635 380 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 PRKD3O94806 890 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 LGI1O95970 557 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 COX4I1P13073 169 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 TACR3P29371 465 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 PRDX6P30041 224 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 SSTR2P30874 369 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 PCGF2P35227 344 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 KCNJ5P48544 419 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 DIO1P49895 249 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 CSNK2A1P68400 391 aaPredicted RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 DMTNQ08495 405 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 SF3A3Q12874 501 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 CAPRIN1Q14444 709 aaKnown RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 DAZAP2Q15038 168 aaPredicted RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 VMACQ2NL98 169 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 FCRLAQ7L513 359 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 PATL1Q86TB9 770 aaKnown RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 ATG4DQ86TL0 474 aaPredicted RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 COMTD1Q86VU5 262 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 KIF18BQ86Y91 864 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 ANKS4BQ8N8V4 417 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 OR10A6Q8NH74 314 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 C3orf49Q96BT1 292 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 PSD2Q9BQI7 771 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 TACO1Q9BSH4 297 aaKnown RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 RBM24Q9BX46 236 aaKnown RBP11.27□□□□□ -0.61
SNORD55-201ENST00000581525 ELOVL5Q9NYP7 299 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 ARMCX1Q9P291 453 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 AP3M1Q9Y2T2 418 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 PDZD2O15018 2839 aa11.27□□□□□ -0.61
SNORD55-201ENST00000581525 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 M0QX08 132 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 SMAD9O15198 467 aaKnown RBP11.26□□□□□ -0.61
SNORD55-201ENST00000581525 TPST2O60704 377 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 FMO6PO60774 539 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 YES1P07947 543 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 ENPP1P22413 925 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 SLC7A1P30825 629 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 CRYBA2P53672 197 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 SLC16A1P53985 500 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 GYS2P54840 703 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 MYBPHQ13203 477 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 NRF1Q16656 503 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 DUSP7Q16829 419 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 MMEL1Q495T6 779 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 RABL3Q5HYI8 236 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 INTS11Q5TA45 600 aaKnown RBP11.26□□□□□ -0.61
SNORD55-201ENST00000581525 FAM91A1Q658Y4 838 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 GDF7Q7Z4P5 450 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 ARMC8Q8IUR7 673 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 STK35Q8TDR2 534 aa11.26□□□□□ -0.61
SNORD55-201ENST00000581525 FAM222BQ8WU58 562 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms