RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 SLC12A2P55011 1212 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 TMEM33P57088 247 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 PROK1P58294 105 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 TRAF3Q13114 568 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 PFKFB4Q16877 469 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 OR4F15Q8NGB8 312 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 PHOSPHO1Q8TCT1 267 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 GPA33Q99795 319 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 EBPLQ9BY08 206 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 KCNF1Q9H3M0 494 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 GLIPR2Q9H4G4 154 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 GIN1Q9NXP7 522 aa9.41□□□□□ -0.9
GGA3-206ENST00000578773 TESQ9UGI8 421 aaKnown RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 LEF1Q9UJU2 399 aaPredicted RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 GPC6Q9Y625 555 aaPredicted RBP9.41□□□□□ -0.9
GGA3-206ENST00000578773 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 A0A1B0GUS0 222 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 TRAPPC2LH3BP13 241 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 M0R233 179 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 SULT2B1O00204 365 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 PPP6CO00743 305 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 SYNGR3O43761 229 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 UGDHO60701 494 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 NDUFA7O95182 113 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 MPGP29372 298 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 PSMD4P55036 377 aaKnown RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 PDK3Q15120 406 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 QPRTQ15274 297 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 ZKSCAN8Q15776 578 aaPredicted RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 TTC19Q6DKK2 380 aaPredicted RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 TMPPEQ6ZT21 453 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 MTDHQ86UE4 582 aaKnown RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 OR1K1Q8NGR3 316 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 LINC01006Q8NI28 216 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 STAG3L4Q8TBR4 150 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 C16orf78Q8WTQ4 265 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 HOXB13Q92826 284 aaPredicted RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 RAB8BQ92930 207 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 POP5Q969H6 163 aaKnown RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 ELP4Q96EB1 424 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 TSPAN17Q96FV3 270 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 ARL5BQ96KC2 179 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 BBS4Q96RK4 519 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 CHIAQ9BZP6 476 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 NOX3Q9HBY0 568 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 SLC6A13Q9NSD5 602 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 OXSMQ9NWU1 459 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 AHSPQ9NZD4 102 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
GGA3-206ENST00000578773 WIPI2Q9Y4P8 454 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 FLVCR1Q9Y5Y0 555 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 TEX264Q9Y6I9 313 aa9.4□□□□□ -0.9
GGA3-206ENST00000578773 K7EIL1 84 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 PIP5K1BO14986 540 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 CLPXO76031 633 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 SLITRK5O94991 958 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 NKX2-2O95096 273 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 MPIG6BO95866 241 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 GSNP06396 782 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 CSF1P09603 554 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 P2RX1P51575 399 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 SLC16A1P53985 500 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 DBPQ10586 325 aaPredicted RBP9.39□□□□□ -0.91
GGA3-206ENST00000578773 DUSP5Q16690 384 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 TIGD2Q4W5G0 525 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 SLC25A53Q5H9E4 307 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 C3orf33Q6P1S2 294 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 SYT10Q6XYQ8 523 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 GSPT2Q8IYD1 628 aaKnown RBP9.39□□□□□ -0.91
GGA3-206ENST00000578773 GTF3AQ92664 365 aaKnown RBP9.39□□□□□ -0.91
GGA3-206ENST00000578773 BCL2L2Q92843 193 aaPredicted RBP9.39□□□□□ -0.91
GGA3-206ENST00000578773 RAB39BQ96DA2 213 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 C16orf58Q96GQ5 468 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 ANKRD27Q96NW4 1050 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 OR11A1Q9GZK7 315 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 MS4A7Q9GZW8 240 aaPredicted RBP9.39□□□□□ -0.91
GGA3-206ENST00000578773 ASH2LQ9UBL3 628 aa9.39□□□□□ -0.91
GGA3-206ENST00000578773 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 A0A1W2PQD3 144 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 SCDO00767 359 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 PCDH7O60245 1069 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
GGA3-206ENST00000578773 PPP1R3DO95685 299 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 IGKV3-15P01624 115 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 GFAPP14136 432 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 STMN1P16949 149 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 TSPAN8P19075 237 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 ATP4BP51164 291 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 SEC61A1P61619 476 aaKnown RBP9.38□□□□□ -0.91
GGA3-206ENST00000578773 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
GGA3-206ENST00000578773 POU3F1Q03052 451 aaPredicted RBP9.38□□□□□ -0.91
GGA3-206ENST00000578773 NPRL3Q12980 569 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 IFT88Q13099 833 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 DAG1Q14118 895 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 C2orf68Q2NKX9 166 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 DEFB112Q30KQ8 113 aa9.38□□□□□ -0.91
GGA3-206ENST00000578773 OTUD3Q5T2D3 398 aaPredicted RBP9.38□□□□□ -0.91
GGA3-206ENST00000578773 ZNF551Q7Z340 670 aaPredicted RBP9.38□□□□□ -0.91
GGA3-206ENST00000578773 ZIC4Q8N9L1 334 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms