RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187	OR10D3	Q8NH80	312 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	OR2V1	Q8NHB1	315 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	FIG4	Q92562	907 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	LRRC58	Q96CX6	371 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC39A3	Q9BRY0	314 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	TMUB1	Q9BVT8	246 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	SPATA9	Q9BWV2	254 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	FAM107B	Q9H098	131 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	MYLK2	Q9H1R3	596 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	COQ10B	Q9H8M1	238 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	CACYBP	Q9HB71	228 aa	Known RBP	11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF226	Q9NYT6	803 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	IFT52	Q9Y366	437 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	TEP1	Q99973	2627 aa	Known RBP	11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	MPDZ	O75970	2070 aa		11.44	□□□□□ -0.58
CCDC57-211	ENST00000578187	CCDC168	Q8NDH2	2452 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	LOC100653049	A0A140TA62	436 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187		A0A1W2PNV4	684 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	TNFSF11	O14788	317 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	KRT34	O76011	436 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	FCGR2A	P12318	317 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC6A2	P23975	617 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	PRKAR1B	P31321	381 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	RYK	P34925	604 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	SFTPD	P35247	375 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	EIF1AX	P47813	144 aa	Known RBP	11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	GZMM	P51124	257 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	PCBP3	P57721	371 aa	Known RBP	11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	CYLC2	Q14093	348 aa	Predicted RBP	11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	PON3	Q15166	354 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	CYP51A1	Q16850	503 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	DEFB113	Q30KQ7	82 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF311	Q5JNZ3	666 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	HBM	Q6B0K9	141 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	NANOGP8	Q6NSW7	305 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	GRINA	Q7Z429	371 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	CPLX4	Q7Z7G2	160 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	MTDH	Q86UE4	582 aa	Known RBP	11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	KRT73	Q86Y46	540 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	TREML1	Q86YW5	311 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	CLIP4	Q8N3C7	705 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	PCYOX1L	Q8NBM8	494 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	C11orf65	Q8NCR3	313 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	HIPK4	Q8NE63	616 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	RP9	Q8TA86	221 aa	Known RBP	11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF563	Q8TA94	476 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	FNDC9	Q8TBE3	224 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC35B4	Q969S0	331 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	RCN3	Q96D15	328 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	NANOG	Q9H9S0	305 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	RNF122	Q9H9V4	155 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	RLIM	Q9NVW2	624 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	FAM53C	Q9NYF3	392 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	PRDM4	Q9UKN5	801 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF232	Q9UNY5	417 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	ANGPT4	Q9Y264	503 aa		11.43	□□□□□ -0.58
CCDC57-211	ENST00000578187	HIVEP1	P15822	2718 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	CFAP73	A6NFT4	308 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187		A8MXE2	369 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	CXCL13	O43927	109 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	ATE1	O95260	518 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	OPN1LW	P04000	364 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	COX4I1	P13073	169 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	UQCRB	P14927	111 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	PCGF2	P35227	344 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	APOBEC1	P41238	236 aa	Known RBP	11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	KCNJ5	P48544	419 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	IDH2	P48735	452 aa	Known RBP	11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	MERTK	Q12866	999 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	GUSBP1	Q15486	140 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	SGCB	Q16585	318 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	PDSS1	Q5T2R2	415 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	DHRS4L2	Q6PKH6	230 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF550	Q7Z398	422 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	CALHM3	Q86XJ0	350 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC30A8	Q8IWU4	369 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	POU5F2	Q8N7G0	328 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	OR10A6	Q8NH74	314 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	SH3GL1	Q99961	368 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	SPATA5L1	Q9BVQ7	753 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	ARMC7	Q9H6L4	198 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	FANCF	Q9NPI8	374 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	ELOVL5	Q9NYP7	299 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	CHRNA9	Q9UGM1	479 aa		11.42	□□□□□ -0.58
CCDC57-211	ENST00000578187	TNFSF13	O75888	250 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	AQP8	O94778	261 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	HRG	P04196	525 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	GKN3P	P0CG01	181 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	FOSL1	P15407	271 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	ACAA2	P42765	397 aa	Known RBP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC1A3	P43003	542 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	HTR3A	P46098	478 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	PCYT1A	P49585	367 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	LSM11	P83369	360 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	POU4F3	Q15319	338 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF239	Q16600	458 aa	Known RBP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.41	□□□□□ -0.58

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