RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PCSK6P29122 969 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 CCKARP32238 428 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 SIRPAP78324 504 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 LARS2Q15031 903 aaKnown RBP14.31□□□□□ -0.12
VAPA-204ENST00000577901 PON3Q15166 354 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 MAPK11Q15759 364 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 PRAMEF8Q5VWM4 474 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 PRAMEF7Q5VXH5 474 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 HBMQ6B0K9 141 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 DLEU7Q6UYE1 221 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 C20orf204Q6ZNR8 217 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 MSRB3Q8IXL7 192 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 DPP10Q8N608 796 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 OR10D3Q8NH80 312 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 OR2V1Q8NHB1 315 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 FIG4Q92562 907 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 ZNF845Q96IR2 970 aaPredicted RBP14.31□□□□□ -0.12
VAPA-204ENST00000577901 KLHL15Q96M94 604 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 ZNF317Q96PQ6 595 aaPredicted RBP14.31□□□□□ -0.12
VAPA-204ENST00000577901 HS3ST6Q96QI5 342 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 ARMC7Q9H6L4 198 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 MCTS1Q9ULC4 181 aaKnown RBP14.31□□□□□ -0.12
VAPA-204ENST00000577901 IFT52Q9Y366 437 aa14.31□□□□□ -0.12
VAPA-204ENST00000577901 FN1P02751 2386 aaKnown RBP14.3□□□□□ -0.12
VAPA-204ENST00000577901 TRBV5-3A0A0A0MS03 114 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 TRIM64BA6NI03 449 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 KIAA1324LA8MWY0 1029 aaPredicted RBP14.3□□□□□ -0.12
VAPA-204ENST00000577901 C16orf97H3BN30 126 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 ETV2O00321 342 aaPredicted RBP14.3□□□□□ -0.12
VAPA-204ENST00000577901 TNFSF11O14788 317 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 NTN1O95631 604 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 NUDT7P0C024 238 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 GPX2P18283 190 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 IL11P20809 199 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 RYKP34925 604 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 SFTPDP35247 375 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 KCNJ5P48544 419 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 CARD18P57730 90 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 SESN3P58005 492 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 SELENBP1Q13228 472 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 NFYCQ13952 458 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 MAPRE2Q15555 327 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 LIN52Q52LA3 116 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 RUNDC3AQ59EK9 446 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 GCNT6Q5T4J0 391 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 PPP4R4Q6NUP7 873 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 ZNF550Q7Z398 422 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 DHDDSQ86SQ9 333 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 ZNF440Q8IYI8 595 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 ATP6V1C2Q8NEY4 427 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 BBS10Q8TAM1 723 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 FNDC9Q8TBE3 224 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 CNOT9Q92600 299 aaKnown RBP14.3□□□□□ -0.12
VAPA-204ENST00000577901 OSTF1Q92882 214 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 MAL2Q969L2 176 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 ZC3HAV1LQ96H79 300 aaKnown RBP14.3□□□□□ -0.12
VAPA-204ENST00000577901 RNF122Q9H9V4 155 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 BCL2L10Q9HD36 194 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 SAR1AQ9NR31 198 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 ACER3Q9NUN7 267 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 DSPPQ9NZW4 1301 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 FBN3Q75N90 2809 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 MED12LQ86YW9 2145 aa14.3□□□□□ -0.12
VAPA-204ENST00000577901 A0A0J9YW62 118 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 EFNA2O43921 213 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 CXCL13O43927 109 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 BCAS1O75363 584 aaPredicted RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 CGAP01215 116 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 THBS1P07996 1170 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 CD8BP10966 210 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 APOBEC1P41238 236 aaKnown RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 MERTKQ12866 999 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 KLF10Q13118 480 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 CTU2Q2VPK5 515 aaKnown RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 TMEM176BQ3YBM2 270 aaPredicted RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 MMEL1Q495T6 779 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 MRPL2Q5T653 305 aaKnown RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 GTF2IRD2BQ6EKJ0 949 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 PLEKHM3Q6ZWE6 761 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 GRINAQ7Z429 371 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 GTF2IRD2Q86UP8 949 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 VRK2Q86Y07 508 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 ZNF610Q8N9Z0 462 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 ZNF524Q96C55 264 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 REXO5Q96IC2 774 aaKnown RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 ADGRG7Q96K78 797 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 ANKRD27Q96NW4 1050 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 CGREF1Q99674 301 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 MDFIQ99750 246 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 PRDM4Q9UKN5 801 aa14.29□□□□□ -0.12
VAPA-204ENST00000577901 SPIN1Q9Y657 262 aaPredicted RBP14.29□□□□□ -0.12
VAPA-204ENST00000577901 CDHR4A6H8M9 788 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 DYNC1I1O14576 645 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 PGM3O95394 542 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 PABPC4LP0CB38 370 aaKnown RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 ARAFP10398 606 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms