RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TIMM10BQ9Y5J6 103 aa1.87□□□□□ -2.11
COPS3-213ENST00000577210 KIF25-AS1Q9Y6Z4 181 aa1.87□□□□□ -2.11
COPS3-213ENST00000577210 FRMPD4Q14CM0 1322 aa1.87□□□□□ -2.11
COPS3-213ENST00000577210 TTC41PQ6P2S7 1318 aa1.87□□□□□ -2.11
COPS3-213ENST00000577210 WDR19Q8NEZ3 1342 aa1.87□□□□□ -2.11
COPS3-213ENST00000577210 ANKRD30BQ9BXX2 1392 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 KLF18A0A0U1RQI7 1052 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SERTM2A0A1B0GWG4 89 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 HEATR9A2RTY3 570 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 EPOPA6NHQ4 379 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 OR52A4PA6NMU1 304 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SNTNA6NMZ2 147 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 E7ESA3 106 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 NPIPA7E9PJI5 369 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 LSM1O15116 133 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 MSH4O15457 936 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 RGS16O15492 202 aaPredicted RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 DNAJB6O75190 326 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 ATP5LO75964 103 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SEMG1P04279 462 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 P0C879 139 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 NPIPA8P0DM63 369 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SLC2A3P11169 496 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 DBTP11182 482 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 SFTPCP11686 197 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 PGCP20142 388 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 TBXA2RP21731 343 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 GABRR1P24046 479 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 MMP11P24347 488 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 GNA11P29992 359 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 CASP14P31944 242 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 YWHABP31946 246 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 CCR1P32246 355 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SSR1P43307 286 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 RPL29P47914 159 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 CCT3P49368 545 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 HNRNPA3P51991 378 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 ATP1B3P54709 279 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 LIM2P55344 173 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 RPL8P62917 257 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 SRSF5Q13243 272 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 ORC2Q13416 577 aaPredicted RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 GANABQ14697 944 aaKnown RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 KYAT1Q16773 422 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 NDUFA9Q16795 377 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SLC5A12Q1EHB4 618 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 LRRC36Q1X8D7 754 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SLC25A52Q3SY17 297 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 BCL7AQ4VC05 210 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 FAM120AOSQ5T036 256 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 PVRIGQ6DKI7 326 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 FAM71F2Q6NXP2 309 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 Q6ZPB1 254 aaPredicted RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 RUFY3Q7L099 469 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 GDPD3Q7L5L3 318 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 MOB3BQ86TA1 216 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 CCDC50Q8IVM0 306 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 LRRC75A-AS1Q8N1F1 130 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 FBXL16Q8N461 479 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 ALLCQ8N6M5 410 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 MFSD9Q8NBP5 474 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SDR9C7Q8NEX9 313 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 CCDC148Q8NFR7 591 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 OR2L5Q8NG80 312 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 OR10A7Q8NGE5 316 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SLC2A14Q8TDB8 520 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 DNAJA4Q8WW22 397 aaPredicted RBP1.86□□□□□ -2.11
COPS3-213ENST00000577210 TCTEX1D2Q8WW35 142 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 BADQ92934 168 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 C10orf35Q96D05 121 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 PHYHIPLQ96FC7 376 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 COQ2Q96H96 371 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 RANBP9Q96S59 729 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 COPS8Q99627 209 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SLC39A3Q9BRY0 314 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 NICN1Q9BSH3 213 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 CNPY3Q9BT09 278 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 CHRDL1Q9BU40 450 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 GLIPR2Q9H4G4 154 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 ZNF702PQ9H963 129 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 ANKRA2Q9H9E1 313 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 MCCC2Q9HCC0 563 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 ZFP14Q9HCL3 533 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SMOXQ9NWM0 555 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 RAB20Q9NX57 234 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 HOXC10Q9NYD6 342 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SIGLEC8Q9NYZ4 499 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 PTTG3PQ9NZH4 202 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SPATA7Q9P0W8 599 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SPRR3Q9UBC9 169 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 PISDQ9UG56 409 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 SLC7A8Q9UHI5 535 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 NPIPA1Q9UND3 350 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 PIGLQ9Y2B2 252 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 IFT52Q9Y366 437 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 NPTNQ9Y639 398 aa1.86□□□□□ -2.11
COPS3-213ENST00000577210 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.85□□□□□ -2.11
COPS3-213ENST00000577210 FAM240BA0A1B0GVZ2 78 aa1.85□□□□□ -2.11
COPS3-213ENST00000577210 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.85□□□□□ -2.11
COPS3-213ENST00000577210 A0A1W2PQ72 361 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms