RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 M6PRP20645 277 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 DLX5P56178 289 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 SIRPAP78324 504 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 SHISA6Q6ZSJ9 500 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 DNAAF1Q8NEP3 725 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 QPCTLQ9NXS2 382 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 EDARQ9UNE0 448 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 A0A1W2PR48 441 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 PEX12O00623 359 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 PTHLHP12272 177 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 RNH1P13489 461 aaKnown RBP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 SPOCK1Q08629 439 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 RUNX3Q13761 415 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 TRMT12Q53H54 448 aaKnown RBP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF546Q86UE3 836 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZFAND1Q8TCF1 268 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ELP4Q96EB1 424 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 TGM7Q96PF1 710 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 SLC23A2Q9UGH3 650 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 A0A0A6YYJ9 748 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 CLUP10909 449 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ERVFC1P60507 584 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 MRPL58Q14197 206 aaKnown RBP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 OCLNQ16625 522 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 METAP1DQ6UB28 335 aaPredicted RBP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 SMARCD2Q92925 531 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 SFXN2Q96NB2 322 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZFYVE21Q9BQ24 234 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 TMEM43Q9BTV4 400 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZDHHC5Q9C0B5 715 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 MAN2C1Q9NTJ4 1040 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 KCNN3Q9UGI6 736 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 GPR34Q9UPC5 381 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 TRBV5-4A0A0C4DH59 114 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF726A6NNF4 738 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ELOAQ14241 798 aaKnown RBP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 DPY19L4Q7Z388 723 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 OR9A4Q8NGU2 314 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ADOQ96SZ5 270 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF436Q9C0F3 470 aaPredicted RBP16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 A4GALTQ9NPC4 353 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 KLRF1Q9NZS2 232 aa16.63■□□□□ 0.25
ATPAF1-214ENST00000576409 PRAMEF4O60810 478 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 KNG1P01042 644 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 CPMP14384 443 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 HTR1FP30939 366 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF616Q08AN1 781 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 PDE7AQ13946 482 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 IRF4Q15306 451 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 PRAMEF9Q5VWM5 478 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 TMEM106AQ96A25 262 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 NTN1O95631 604 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 BCL6P41182 706 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 ZSCAN1Q8NBB4 408 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 OR6N1Q8NGY5 312 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 OR2L8Q8NGY9 312 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 LMX1AQ8TE12 382 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 RBP7Q96R05 134 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 KCNE3Q9Y6H6 103 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 LGI1O95970 557 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 NPR2P20594 1047 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 C1QTNF12Q5T7M4 302 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 VASNQ6EMK4 673 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 MBOAT2Q6ZWT7 520 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 ADGRF3Q8IZF5 1079 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 TP53I13Q8NBR0 393 aaPredicted RBP16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF680Q8NEM1 530 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 GPR148Q8TDV2 347 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 TEAD3Q99594 435 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 ELF4Q99607 663 aaPredicted RBP16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 SEMA4CQ9C0C4 833 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 TMEM14AQ9Y6G1 99 aa16.62■□□□□ 0.25
ATPAF1-214ENST00000576409 LAMB2P55268 1798 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 ABLIM3O94929 683 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 INHBBP09529 407 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 NFYAP23511 347 aaPredicted RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 P2RY2P41231 377 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 C1orf189Q5VU69 101 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 LAIR1Q6GTX8 287 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 ZNF454Q8N9F8 522 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 TEX19Q8NA77 164 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 OR51D1Q8NGF3 324 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 TMEM129A0AVI4 362 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 UBL3O95164 117 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 EIF4EP06730 217 aaKnown RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 RBMS1P29558 406 aaKnown RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 ARRB1P49407 418 aaPredicted RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 EIF5AL1Q6IS14 154 aaKnown RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 FBXO42Q6P3S6 717 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 SLC29A4Q7RTT9 530 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 OR13C3Q8NGS6 347 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 SLC6A17Q9H1V8 727 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 ADAM18Q9Y3Q7 739 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 CD160O95971 181 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 GNRH1P01148 92 aa16.61■□□□□ 0.25
ATPAF1-214ENST00000576409 IFNA21P01568 189 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms