RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SRXN1Q9BYN0 137 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 OR11A1Q9GZK7 315 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 PRDM14Q9GZV8 571 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 LAT2Q9GZY6 243 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 RAD21L1Q9H4I0 556 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 COQ10BQ9H8M1 238 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 QPCTLQ9NXS2 382 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 RAB26Q9ULW5 256 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 AURKCQ9UQB9 309 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 LIPT1Q9Y234 373 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 SLC5A6Q9Y289 635 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 MEMO1Q9Y316 297 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 GPC6Q9Y625 555 aaPredicted RBP7.12□□□□□ -1.27
CCDC40-215ENST00000576033 HRNRQ86YZ3 2850 aaPredicted RBP7.12□□□□□ -1.27
CCDC40-215ENST00000576033 ICE1Q9Y2F5 2266 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 CENPEQ02224 2701 aa7.12□□□□□ -1.27
CCDC40-215ENST00000576033 FBN2P35556 2912 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 A0A0G2JNJ9 132 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 A0A0G2JPF8 293 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 A0A0J9YW62 118 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ZC3H12DA2A288 527 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 NKX2-6A6NCS4 301 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 FAM90A27PA6NNH2 459 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 CLCA1A8K7I4 914 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 HNRNPCL2B2RXH8 293 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 HNRNPCL3B7ZW38 293 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 C5orf58C9J3I9 102 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 C19orf84I3L1E1 186 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 SOCS2O14508 198 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PRRG2O14669 202 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 GSTA4O15217 222 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 DEAF1O75398 565 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 GMNNO75496 209 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PRKD3O94806 890 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 DBIP07108 87 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 HNRNPCL4P0DMR1 293 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 GLI4P10075 376 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF708P17019 499 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ACVR2AP27037 513 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 LCN1P31025 176 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 KDELR2P33947 212 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ACAA2P42765 397 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 IDH2P48735 452 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ANXA11P50995 505 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF41P51814 821 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 TXNL4AP83876 142 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 CHRNB3Q05901 458 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 RBPJQ06330 500 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PMPCAQ10713 525 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 MERTKQ12866 999 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 EPS8Q12929 822 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 FOXF2Q12947 444 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 DUSP7Q16829 419 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 LRRC23Q53EV4 343 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 NHSL2Q5HYW2 709 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 RNF220Q5VTB9 566 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 REEP3Q6NUK4 255 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PLEKHM3Q6ZWE6 761 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 EIF3MQ7L2H7 374 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PIWIL3Q7Z3Z3 882 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 P3H2Q8IVL5 708 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 MISPQ8IVT2 679 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PEX5LQ8IYB4 626 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 GTPBP8Q8N3Z3 284 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 FAM26EQ8N5C1 309 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 C11orf65Q8NCR3 313 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 VANGL1Q8TAA9 524 aaPredicted RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 FAM162AQ96A26 154 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 EME1Q96AY2 570 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 PYURFQ96I23 114 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 ADGRG7Q96K78 797 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 UCK2Q9BZX2 261 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 HOXD1Q9GZZ0 328 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 SEMA6AQ9H2E6 1030 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 YY1AP1Q9H869 796 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 BCL2L10Q9HD36 194 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 POLE3Q9NRF9 147 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 SDHAF3Q9NRP4 125 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 Q9UFV3 132 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 CLEC4AQ9UMR7 237 aa7.11□□□□□ -1.27
CCDC40-215ENST00000576033 SAMD4AQ9UPU9 718 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 SPTBN1Q01082 2364 aaKnown RBP7.11□□□□□ -1.27
CCDC40-215ENST00000576033 HCFC1P51610 2035 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 TMEM72A0PK05 275 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 OR14I1A6ND48 311 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF814B7Z6K7 855 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 H3BNH8 94 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 M0QX08 132 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 BCKDKO14874 412 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CLOCKO15516 846 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CXCL13O43927 109 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 EIF4E2O60573 245 aaKnown RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 RAMP1O60894 148 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 AQP8O94778 261 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 MFN2O95140 757 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SERPINA1P01009 418 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms