RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RGS8P57771 180 aaPredicted RBP13.65□□□□□ -0.22
LITAF-217ENST00000575426 PSME3P61289 254 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 LIPEQ05469 1076 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 CTU2Q2VPK5 515 aaKnown RBP13.65□□□□□ -0.22
LITAF-217ENST00000575426 SLC25A35Q3KQZ1 300 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 SYT14P1Q58G82 188 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 ADGRG3Q86Y34 549 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 MCEMP1Q8IX19 187 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 FNDC9Q8TBE3 224 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 FIG4Q92562 907 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 ADGRG7Q96K78 797 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 ADAM19Q9H013 955 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 TMEM27Q9HBJ8 222 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 ARL8BQ9NVJ2 186 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 NDE1Q9NXR1 346 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 SELENONQ9NZV5 590 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 OSGIN1Q9UJX0 560 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 COL12A1Q99715 3063 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 USP9YO00507 2555 aaPredicted RBP13.64□□□□□ -0.23
LITAF-217ENST00000575426 A0A1W2PNR3 127 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 SULT2B1O00204 365 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 SYT5O00445 386 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 ZNF208O43345 1280 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 IL18BPO95998 194 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 CRHP06850 196 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 KCNJ5P48544 419 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 RAC3P60763 192 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 CSNK2A1P68400 391 aaPredicted RBP13.64□□□□□ -0.23
LITAF-217ENST00000575426 HOXC5Q00444 222 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 KRT72Q14CN4 511 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 GLIPR1L2Q4G1C9 344 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 FAM91A1Q658Y4 838 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 C8orf82Q6P1X6 216 aaPredicted RBP13.64□□□□□ -0.23
LITAF-217ENST00000575426 RANBP3LQ86VV4 465 aaPredicted RBP13.64□□□□□ -0.23
LITAF-217ENST00000575426 GCNT2Q8N0V5 402 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 NAXEQ8NCW5 288 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 PROX1Q92786 737 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 ZHX1-C8orf76Q96EF9 292 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 ZNF559Q9BR84 538 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 SFXN3Q9BWM7 321 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 UCK2Q9BZX2 261 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 TRIM2Q9C040 744 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 ALG2Q9H553 416 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 SPAG4Q9NPE6 437 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 ADA2Q9NZK5 511 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 TESQ9UGI8 421 aaKnown RBP13.64□□□□□ -0.23
LITAF-217ENST00000575426 BAG5Q9UL15 447 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 USP22Q9UPT9 525 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 HDGFL3Q9Y3E1 203 aa13.64□□□□□ -0.23
LITAF-217ENST00000575426 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
LITAF-217ENST00000575426 TMEM72A0PK05 275 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 NKX2-6A6NCS4 301 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 NME4O00746 187 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 GMNNO75496 209 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 GCM2O75603 506 aaPredicted RBP13.63□□□□□ -0.23
LITAF-217ENST00000575426 LGI1O95970 557 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 ENPP1P22413 925 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 KDELR2P33947 212 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 AGFG1P52594 562 aaKnown RBP13.63□□□□□ -0.23
LITAF-217ENST00000575426 CTBP2P56545 445 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 CDSNQ15517 529 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 DUSP7Q16829 419 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 SP5Q6BEB4 398 aaPredicted RBP13.63□□□□□ -0.23
LITAF-217ENST00000575426 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 TMPPEQ6ZT21 453 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 LIX1LQ8IVB5 337 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 FITM2Q8N6M3 262 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 RNF217Q8TC41 542 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 DNAJA4Q8WW22 397 aaPredicted RBP13.63□□□□□ -0.23
LITAF-217ENST00000575426 TAMM41Q96BW9 452 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 NSL1Q96IY1 281 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 KCTD14Q9BQ13 255 aaPredicted RBP13.63□□□□□ -0.23
LITAF-217ENST00000575426 RNF122Q9H9V4 155 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 GLRX2Q9NS18 164 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 SLC9A8Q9Y2E8 581 aa13.63□□□□□ -0.23
LITAF-217ENST00000575426 PTPN13Q12923 2485 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 ELOA3DA6NLF2 546 aaPredicted RBP13.62□□□□□ -0.23
LITAF-217ENST00000575426 AQP8O94778 261 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 PMS2P2O95744 297 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 FESP07332 822 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 GSK3BP49841 420 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 DIO1P49895 249 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 OR2B6P58173 313 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 FOXF2Q12947 444 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 ZNF239Q16600 458 aaKnown RBP13.62□□□□□ -0.23
LITAF-217ENST00000575426 ELOA3BQ3SY89 546 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 LRRC23Q53EV4 343 aaPredicted RBP13.62□□□□□ -0.23
LITAF-217ENST00000575426 SLC43A2Q8N370 569 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 LSMEM1Q8N8F7 131 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 ELOA3Q8NG57 546 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 VANGL1Q8TAA9 524 aaPredicted RBP13.62□□□□□ -0.23
LITAF-217ENST00000575426 ROBO4Q8WZ75 1007 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 LZICQ8WZA0 190 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 C3orf49Q96BT1 292 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 MCHR1Q99705 422 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 ARHGDIGQ99819 225 aa13.62□□□□□ -0.23
LITAF-217ENST00000575426 SRXN1Q9BYN0 137 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms