RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MRPL17Q9NRX2 175 aaKnown RBP13.33□□□□□ -0.28
SMG6-215ENST00000574501 POT1Q9NUX5 634 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 ANKRD10Q9NXR5 420 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 TAC3Q9UHF0 121 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 LHX6Q9UPM6 363 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 DISC1C4P0D8 188 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 SNAPC5O75971 98 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 RASGRP1O95267 797 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 IL5P05113 134 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 DUSP2Q05923 314 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TGM3Q08188 693 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 IRF5Q13568 498 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TMEM69Q5SWH9 247 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 Q6ZNB5 142 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 RNF180Q86T96 592 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TMEM150AQ86TG1 271 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 PFN4Q8NHR9 129 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TIFAQ96CG3 184 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TSNAXQ99598 290 aaKnown RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 GFI1Q99684 422 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 BARX1Q9HBU1 254 aaPredicted RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 C20orf141Q9NUB4 165 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 WSB2Q9NYS7 404 aaPredicted RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 UNC119BA6NIH7 251 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 BHLHE40O14503 412 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TBX19O60806 448 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 ARL6IP5O75915 188 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 SERPINA3P01011 423 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 H2AFB1P0C5Y9 115 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 MAKP20794 623 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 STARP49675 285 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TAS2R38P59533 333 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 GMFBP60983 142 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 TNFRSF17Q02223 184 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 SLC6A19Q695T7 634 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 LDLRAD3Q86YD5 345 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 PUSL1Q8N0Z8 303 aaKnown RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 ZFP82Q8N141 532 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 MUC20Q8N307 709 aaPredicted RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 OR2AK2Q8NG84 335 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 ZNF689Q96CS4 500 aaPredicted RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
SMG6-215ENST00000574501 FAM83CQ9BQN1 747 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 FKRPQ9H9S5 495 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 PLEKHM1Q9Y4G2 1056 aa13.32□□□□□ -0.28
SMG6-215ENST00000574501 NUP210Q8TEM1 1887 aaPredicted RBP13.31□□□□□ -0.28
SMG6-215ENST00000574501 TRAV20A0A0B4J274 112 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 SLC22A31A6NKX4 558 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 H7BY64 318 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 BMP7P18075 431 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 PVALBP20472 110 aaPredicted RBP13.31□□□□□ -0.28
SMG6-215ENST00000574501 PSMB5P28074 263 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 KCNJ3P48549 501 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 RPS11P62280 158 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMG6-215ENST00000574501 FOXK2Q01167 660 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 GUCA2BQ16661 112 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 OLFML2AQ68BL7 652 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 NUDT13Q86X67 352 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 GJD3Q8N144 294 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 DNAAF1Q8NEP3 725 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 OR4D10Q8NGI6 311 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 PXYLP1Q8TE99 480 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 TNFAIP8L1Q8WVP5 186 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 TCEAL4Q96EI5 215 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 PRAP1Q96NZ9 151 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 OR7D2Q96RA2 312 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 CPEB1Q9BZB8 566 aaKnown RBP13.31□□□□□ -0.28
SMG6-215ENST00000574501 NOX4Q9NPH5 578 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 SYT5O00445 386 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 ZNF254O75437 659 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 ZIC2O95409 532 aaPredicted RBP13.31□□□□□ -0.28
SMG6-215ENST00000574501 SRMP19623 302 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 CDK2P24941 298 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 PRR5P85299 388 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 IL10RAQ13651 578 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 CBFBQ13951 182 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 ZNF528Q3MIS6 628 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 CST9Q5W186 159 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 TSSK4Q6SA08 328 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 SLC36A1Q7Z2H8 476 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 UBE3DQ7Z6J8 389 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 OR5AR1Q8NGP9 310 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 FIBINQ8TAL6 211 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 MACROD1Q9BQ69 325 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 OR2AG1Q9H205 316 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 NRIP3Q9NQ35 241 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 BIN3Q9NQY0 253 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 INPP5EQ9NRR6 644 aa13.31□□□□□ -0.28
SMG6-215ENST00000574501 SIDT1Q9NXL6 827 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms