RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 RIMS3Q9UJD0 308 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 RAB26Q9ULW5 256 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 PCDHGB4Q9UN71 923 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 CORO2BQ9UQ03 480 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 AURKCQ9UQB9 309 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 TESMINQ9Y4I5 508 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 VPS13CQ709C8 3753 aa8.67□□□□□ -1.02
NPLOC4-216ENST00000574344 FLNAP21333 2647 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 A0A096LPI6 279 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 RNF103-CHMP3A0A140T963 221 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 EVPLLA8MZ36 301 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 FAM220BPB1ANY3 271 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 H0YJX3 145 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 ANKRD28O15084 1053 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CYP7B1O75881 506 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 SOX30O94993 753 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CD8BP10966 210 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 UQCRBP14927 111 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 PPIBP23284 216 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 FASP25445 335 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 IL12AP29459 219 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 MSX2P35548 267 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 UGT2B10P36537 528 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 EIF1P41567 113 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 SLC6A8P48029 635 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 P2RX1P51575 399 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 AQP4P55087 323 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 RPS26P62854 115 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 RAC1P63000 192 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 HBA1P69905 142 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CYP51A1Q16850 503 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 TMEM44Q2T9K0 475 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 FAM98BQ52LJ0 330 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 PAGE3Q5JUK9 113 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 SPANXN4Q5MJ08 99 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 NANOGP8Q6NSW7 305 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 ZNF474Q6S9Z5 364 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 ESPNLQ6ZVH7 1005 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 C16orf62Q7Z3J2 963 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CAMKMTQ7Z624 323 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 TGIF2LYQ8IUE0 185 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CLECL1Q8IZS7 167 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 PACRGLQ8N7B6 248 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 ATP6V1C2Q8NEY4 427 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 OR2T12Q8NG77 320 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 OR6K3Q8NGY3 331 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 OR2V1Q8NHB1 315 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 PSMA8Q8TAA3 256 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 COQ8BQ96D53 544 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 GMPPAQ96IJ6 420 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 TEX37Q96LM6 180 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 KLHL15Q96M94 604 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 THUMPD3Q9BV44 507 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 HOXD1Q9GZZ0 328 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CXXC4Q9H2H0 198 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 NANOGQ9H9S0 305 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 SLC52A3Q9NQ40 469 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 ELOVL5Q9NYP7 299 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
NPLOC4-216ENST00000574344 A0A0J9YW62 118 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 C7orf72A4D263 438 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 GJE1A6NN92 205 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 C16orf97H3BN30 126 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 RFXANKO14593 260 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ATE1O95260 518 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 CPSF4O95639 269 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 UBL4AP11441 157 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 KLK2P20151 261 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 MATN1P21941 496 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ELK4P28324 431 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 CCKARP32238 428 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ATP12AP54707 1039 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 CASP9P55211 416 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 SUMO3P55854 103 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 MTPNP58546 118 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 BLMHQ13867 455 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 GPR68Q15743 365 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 DEFB113Q30KQ7 82 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 NDUFAF6Q330K2 333 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 RABL3Q5HYI8 236 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 EXOSC6Q5RKV6 272 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 PDZK1Q5T2W1 519 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ANXA8L1Q5VT79 327 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ANKRD34AQ69YU3 496 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 GTF2IRD2BQ6EKJ0 949 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ERICH5Q6P6B1 374 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 CBLN3Q6UW01 205 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 C6orf120Q7Z4R8 191 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 GTF2IRD2Q86UP8 949 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 STK32CQ86UX6 486 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 ANKRD46Q86W74 232 aa8.65□□□□□ -1.02
NPLOC4-216ENST00000574344 RIMKLAQ8IXN7 391 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms