RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SERINC1Q9NRX5 453 aa16■□□□□ 0.15
CHD3-214ENST00000572579 CHRNA9Q9UGM1 479 aa16■□□□□ 0.15
CHD3-214ENST00000572579 SLC35A3Q9Y2D2 325 aa16■□□□□ 0.15
CHD3-214ENST00000572579 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
CHD3-214ENST00000572579 PGM3O95394 542 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 AGR2O95994 175 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 CD8AP01732 235 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 IGHV3-9P01782 118 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 PGRP06401 933 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 THBS1P07996 1170 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 CCNA2P20248 432 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 COX5AP20674 150 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 RPS4Y1P22090 263 aaKnown RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 CHI3L1P36222 383 aaPredicted RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 IDH2P48735 452 aaKnown RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 KHKP50053 298 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 H3F3AP84243 136 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 KRTAP1-1Q07627 177 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 PDK3Q15120 406 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 ZNF672Q499Z4 452 aaPredicted RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 GPAT3Q53EU6 434 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 ATAD3BQ5T9A4 648 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 PRIMA1Q86XR5 153 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 ZNF433Q8N7K0 673 aaPredicted RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 VPS37AQ8NEZ2 397 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 KBTBD8Q8NFY9 601 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 TMEM171Q8WVE6 324 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 TRNT1Q96Q11 434 aaKnown RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 OR52E6Q96RD3 313 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 TACO1Q9BSH4 297 aaKnown RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 POTEKPQ9BYX7 375 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 TRIM2Q9C040 744 aa15.99■□□□□ 0.15
CHD3-214ENST00000572579 EXOSC3Q9NQT5 275 aaKnown RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.99■□□□□ 0.15
CHD3-214ENST00000572579 TMEM120BA0PK00 339 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 TMEM72A0PK05 275 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 SHISA9B4DS77 424 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 TFPIP10646 304 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 IMPDH2P12268 514 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 ATP5J2P56134 94 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 TNK1Q13470 666 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 DPY19L1Q2PZI1 675 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 ZNF621Q6ZSS3 439 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 GRINAQ7Z429 371 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 SPATA19Q7Z5L4 167 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 GALNT5Q7Z7M9 940 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 SMAP2Q8WU79 429 aaPredicted RBP15.98■□□□□ 0.15
CHD3-214ENST00000572579 OIT3Q8WWZ8 545 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 PANX1Q96RD7 426 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 THAP1Q9NVV9 213 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 RLIMQ9NVW2 624 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 OSGIN1Q9UJX0 560 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 CHST2Q9Y4C5 530 aa15.98■□□□□ 0.15
CHD3-214ENST00000572579 MAGED1Q9Y5V3 778 aaPredicted RBP15.98■□□□□ 0.15
CHD3-214ENST00000572579 ZC3H12DA2A288 527 aaKnown RBP15.97■□□□□ 0.15
CHD3-214ENST00000572579 HDAC3O15379 428 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 NDUFS7O75251 213 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 PMS2P2O95744 297 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 CD3EP07766 207 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 KITP10721 976 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 GTDC1Q4AE62 458 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 SLC9B1Q4ZJI4 515 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 DNAJC14Q6Y2X3 702 aaPredicted RBP15.97■□□□□ 0.15
CHD3-214ENST00000572579 LRRC74BQ6ZQY2 392 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 ARFGAP2Q8N6H7 521 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 ZNF563Q8TA94 476 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 MGARPQ8TDB4 240 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 SLC25A43Q8WUT9 341 aaPredicted RBP15.97■□□□□ 0.15
CHD3-214ENST00000572579 MAELQ96JY0 434 aaKnown RBP15.97■□□□□ 0.15
CHD3-214ENST00000572579 RSPO3Q9BXY4 272 aaPredicted RBP15.97■□□□□ 0.15
CHD3-214ENST00000572579 CXorf56Q9H5V9 222 aa15.97■□□□□ 0.15
CHD3-214ENST00000572579 TMED7-TICAM2A0A0A6YYA0 188 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 PDLIM1O00151 329 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 PTNP21246 168 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 CDKN1AP38936 164 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 SLC16A1P53985 500 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 RPS4XP62701 263 aaKnown RBP15.96■□□□□ 0.15
CHD3-214ENST00000572579 CSNK2A1P68400 391 aaPredicted RBP15.96■□□□□ 0.15
CHD3-214ENST00000572579 PPA1Q15181 289 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 STK11Q15831 433 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 HHATQ5VTY9 493 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 FBXW9Q5XUX1 488 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 ZNF100Q8IYN0 542 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 MAPK1IP1LQ8NDC0 245 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 ARL8AQ96BM9 186 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 ADAM19Q9H013 955 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 ESRP2Q9H6T0 727 aaKnown RBP15.96■□□□□ 0.15
CHD3-214ENST00000572579 MTHFD2LQ9H903 347 aaPredicted RBP15.96■□□□□ 0.15
CHD3-214ENST00000572579 LIPT1Q9Y234 373 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 TMED7Q9Y3B3 224 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 HDGFL3Q9Y3E1 203 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 HIVEP2P31629 2446 aa15.96■□□□□ 0.15
CHD3-214ENST00000572579 A0A1W2PR80 420 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 TMCC2O75069 709 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 PCSK6P29122 969 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 TACR3P29371 465 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 ACAA2P42765 397 aaKnown RBP15.95■□□□□ 0.14
CHD3-214ENST00000572579 OR2B6P58173 313 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 EPS8Q12929 822 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms