RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CCNIQ14094 377 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 C3AR1Q16581 482 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 SGCBQ16585 318 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 TMEM176BQ3YBM2 270 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 FGD3Q5JSP0 725 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 PDSS1Q5T2R2 415 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 VASNQ6EMK4 673 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 ZNF585AQ6P3V2 769 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 TTC33Q6PID6 262 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 ESPNLQ6ZVH7 1005 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 GDF7Q7Z4P5 450 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 ATG4DQ86TL0 474 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 ADGRG3Q86Y34 549 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 PM20D2Q8IYS1 436 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 OFCC1Q8IZS5 231 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 C10orf53Q8N6V4 93 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 ST6GALNAC3Q8NDV1 305 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 OR5M9Q8NGP3 310 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 PHF10Q8WUB8 498 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 MPP4Q96JB8 637 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 KLHL15Q96M94 604 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 EPYCQ99645 322 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 TIMP4Q99727 224 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 BARD1Q99728 777 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 CCM2LQ9NUG4 571 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 A4GNTQ9UNA3 340 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 TESMINQ9Y4I5 508 aa8.52□□□□□ -1.05
NPLOC4-208ENST00000572351 USP24Q9UPU5 2620 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 LOC400499M0QZD8 3231 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 A0A087WUJ7 227 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 KPNA4O00629 521 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 TNFSF11O14788 317 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SLC19A2O60779 497 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SEMA7AO75326 666 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 FKBP6O75344 327 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 WISP1O95388 367 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 AHSA1O95433 338 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 ZNF708P17019 499 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 PTNP21246 168 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 GTF2E2P29084 291 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 LHX2P50458 406 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 CLDN20P56880 219 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SMIM11AP58511 58 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 C19orf57Q0VDD7 668 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 TRAM2Q15035 370 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SF3B4Q15427 424 aaKnown RBP eCLIP8.51□□□□□ -1.053e-11■■■□□ 15.4
NPLOC4-208ENST00000572351 BCL2A1Q16548 175 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 GXYLT1Q4G148 440 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SYT14P1Q58G82 188 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 DCST1Q5T197 706 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 ZNF730Q6ZMV8 503 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 RRM2BQ7LG56 351 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 PIWIL3Q7Z3Z3 882 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 CD163Q86VB7 1156 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 PIK3C3Q8NEB9 887 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 OR52J3Q8NH60 311 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 OR2V1Q8NHB1 315 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 FAM57AQ8TBR7 257 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 STMN2Q93045 179 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SLC38A4Q969I6 547 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 DNAJA3Q96EY1 480 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 C7orf34Q96L11 122 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 HS3ST6Q96QI5 342 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 OR5B2Q96R09 309 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 TAPBPLQ9BX59 468 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 OR11A1Q9GZK7 315 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 DENND2DQ9H6A0 471 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 REEP1Q9H902 201 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 NMNAT1Q9HAN9 279 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 TIGARQ9NQ88 270 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 SH3BGRL2Q9UJC5 107 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 TMCC3Q9ULS5 477 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 AP4S1Q9Y587 144 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 MED13Q9UHV7 2174 aa8.51□□□□□ -1.05
NPLOC4-208ENST00000572351 TRGV8A0A0C4DH27 118 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 A0A1W2PNR3 127 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 H0YC42 278 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 H0YHG0 523 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 TNFRSF11BO00300 401 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 FFAR1O14842 300 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 ADAMDEC1O15204 470 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 EFNA2O43921 213 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 ENTPD5O75356 428 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 E2F6O75461 281 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 C1QL1O75973 258 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 KRT36O76013 467 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 GADD45GO95257 159 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 SYNGR4O95473 234 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 CST1P01037 141 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 THY1P04216 161 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 FCGR1AP12314 374 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 CPN1P15169 458 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 SHC1P29353 583 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 RRM2P31350 389 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 IDUAP35475 653 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 RBM34P42696 430 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 MAGEA2P43356 314 aa8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 CLK1P49759 484 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-208ENST00000572351 SUCLG1P53597 346 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms