RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 AUP1Q9Y679 476 aa16.12■□□□□ 0.17
SCARF1-205ENST00000571272 TP53BP1Q12888 1972 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-205ENST00000571272 OR7A10O76100 309 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 NT5EP21589 574 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 PRKACBP22694 351 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 POU6F2P78424 691 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 HES5Q5TA89 166 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 SLC22A10Q63ZE4 541 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 ZC3H14Q6PJT7 736 aaKnown RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 NLRC3Q7RTR2 1065 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 LCN9Q8WX39 176 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 ZNF436Q9C0F3 470 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 IL21RQ9HBE5 538 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 KCMF1Q9P0J7 381 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 NTMQ9P121 344 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 TRAV1-2A0A0B4J238 106 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 PTP4A3O75365 173 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 CCL5P13501 91 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 CPMP14384 443 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 MAT2AP31153 395 aaKnown RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 VEGFCP49767 419 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 EXOSC7Q15024 291 aaKnown RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 FAM78AQ5JUQ0 283 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 RTL4Q6ZR62 310 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 ZAR1Q86SH2 424 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 TEX19Q8NA77 164 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 FAM98AQ8NCA5 519 aaKnown RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 ZNF707Q96C28 371 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 ERMAPQ96PL5 475 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-205ENST00000571272 TIMM29Q9BSF4 260 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 SARGQ9BW04 601 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 GNG8Q9UK08 70 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 SPATA2Q9UM82 520 aa16.11■□□□□ 0.17
SCARF1-205ENST00000571272 TRBV2A0A0J9YWF9 115 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 G3V3Q6 166 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 PSMD9O00233 223 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 P2RX6O15547 441 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 EML2O95834 649 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 LCN1P31025 176 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 PLAURQ03405 335 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 CDK5R1Q15078 307 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 CDONQ4KMG0 1287 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 PXDC1Q5TGL8 231 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 RPL13AP3Q6NVV1 102 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 KANSL1Q7Z3B3 1105 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 FGD2Q7Z6J4 655 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 SMIM4Q8WVI0 70 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 MARVELD3Q96A59 401 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 DDOQ99489 341 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 SLC25A18Q9H1K4 315 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 NUP50Q9UKX7 468 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 TEX51A0A1B0GUA7 166 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 GXYLT2A0PJZ3 443 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 PEX14O75381 377 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 ARL6IP5O75915 188 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 BLVRAP53004 296 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 CLDN12P56749 244 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 RPS11P62280 158 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCARF1-205ENST00000571272 CST6Q15828 149 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 AANATQ16613 207 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 UBE2Q1Q7Z7E8 422 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 ZNF433Q8N7K0 673 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-205ENST00000571272 OR11G2Q8NGC1 345 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 SNX33Q8WV41 574 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 CNOT9Q92600 299 aaKnown RBP16.1■□□□□ 0.17
SCARF1-205ENST00000571272 TRIM43Q96BQ3 446 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-205ENST00000571272 SMIM19Q96E16 107 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 RPS6KB2Q9UBS0 482 aa16.1■□□□□ 0.17
SCARF1-205ENST00000571272 FKTNO75072 461 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 SERPINA3P01011 423 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 PTHLHP12272 177 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 TSPAN5P62079 268 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 ACTC1P68032 377 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 ACTA1P68133 377 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 SIRPAP78324 504 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 DEFB115Q30KQ5 88 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 CLLU1Q5K131 121 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 PSRC1Q6PGN9 363 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 VITQ6UXI7 678 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 CHMP1BQ7LBR1 199 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 PAQR7Q86WK9 346 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 TMEM27Q9HBJ8 222 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 STON1Q9Y6Q2 735 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 M0R233 179 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 IMPA2O14732 288 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 NGFRP08138 427 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 SLC35G6P0C7Q6 338 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 HIST1H1CP16403 213 aaKnown RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 UGT2B7P16662 529 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 EDNRAP25101 427 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 GABRA3P34903 492 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 GBX2P52951 348 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 RAB14P61106 215 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 HSD17B12Q53GQ0 312 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 FAAP20Q6NZ36 180 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 FBXO42Q6P3S6 717 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 OR52I2Q8NH67 350 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 ACTR6Q9GZN1 396 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 HRASLSQ9HDD0 168 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 FLRT3Q9NZU0 649 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms