RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	SRSF4	Q08170	494 aa	Known RBP	11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	SPIN4	Q56A73	249 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	GRTP1	Q5TC63	336 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	KLC3	Q6P597	504 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	ANKRD16	Q6P6B7	361 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	CTAGE3P	Q8IX95	158 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	CENPL	Q8N0S6	344 aa	Predicted RBP	11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	RIBC1	Q8N443	379 aa	Predicted RBP	11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	RFWD2	Q8NHY2	731 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	HOXB13	Q92826	284 aa	Predicted RBP	11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	DVL3	Q92997	716 aa	Predicted RBP	11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	PHF21B	Q96EK2	531 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	PBK	Q96KB5	322 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	ARL5B	Q96KC2	179 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	AMDHD1	Q96NU7	426 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	EBPL	Q9BY08	206 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	C7orf69	Q9H7B7	122 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	ZNF665	Q9H7R5	613 aa		11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.86	□□□□□ -0.51
SMG1-213	ENST00000567737	SERTM1	A2A2V5	107 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	PIP5K1B	O14986	540 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	OTC	P00480	354 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	FSHB	P01225	129 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	GATA3	P23771	443 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	SSTR1	P30872	391 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	CALCR	P30988	508 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	TIA1	P31483	386 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	MAP3K8	P41279	467 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	MAGEA8	P43361	318 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	CCR4	P51679	360 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	SLC16A1	P53985	500 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	PRKAG1	P54619	331 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	UBE2N	P61088	152 aa	Known RBP	11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	POU3F1	Q03052	451 aa	Predicted RBP	11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	ACSM2A	Q08AH3	577 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	C2orf80	Q0P641	193 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	QPRT	Q15274	297 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	PRSS53	Q2L4Q9	553 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	CCNJ	Q5T5M9	372 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	TSPO2	Q5TGU0	170 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	SAXO2	Q658L1	398 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	ACSM2B	Q68CK6	577 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	REP15	Q6BDI9	236 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	LETMD1	Q6P1Q0	360 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	TREML1	Q86YW5	311 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	TMCO5A	Q8N6Q1	288 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	COX18	Q8N8Q8	333 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	WFDC12	Q8WWY7	111 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	TAF15	Q92804	592 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	TMIGD2	Q96BF3	282 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	MS4A5	Q9H3V2	200 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	OXSM	Q9NWU1	459 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	SLC9A8	Q9Y2E8	581 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737	MMP24	Q9Y5R2	645 aa		11.85	□□□□□ -0.51
SMG1-213	ENST00000567737		A0A1B0GUS0	222 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737		E7ESA3	106 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	HPX	P02790	462 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	TFPI	P10646	304 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	ACP2	P11117	423 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	ANP32A	P39687	249 aa	Known RBP	11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	HGFAC	Q04756	655 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	CBFB	Q13951	182 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	NDUFAF6	Q330K2	333 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	C3orf36	Q3SXR2	165 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	TBRG1	Q3YBR2	411 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	TIGD2	Q4W5G0	525 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	SYT14P1	Q58G82	188 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	LRIG3	Q6UXM1	1119 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	SZRD1	Q7Z422	152 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	CCDC91	Q7Z6B0	441 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	GAS2L3	Q86XJ1	694 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	SLC16A11	Q8NCK7	471 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	PYROXD1	Q8WU10	500 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	ZNF524	Q96C55	264 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	RAB39B	Q96DA2	213 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	APIP	Q96GX9	242 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	BOD1	Q96IK1	185 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	C1orf147	Q96MC9	270 aa	Predicted RBP	11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	ZNF416	Q9BWM5	594 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	QRSL1	Q9H0R6	528 aa	Known RBP	11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	MOV10	Q9HCE1	1003 aa	Known RBP	11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	TAS2R7	Q9NYW3	318 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	REV1	Q9UBZ9	1251 aa		11.84	□□□□□ -0.51
SMG1-213	ENST00000567737	OR6C65	A6NJZ3	312 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	FAM159B	A6NKW6	160 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	STX16-NPEPL1	H3BU86	382 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737		M0R233	179 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	STX16	O14662	325 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	SYNGR3	O43761	229 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	KRT6A	P02538	564 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	KRT6B	P04259	564 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	ANXA4	P09525	319 aa	Predicted RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	ALOX5	P09917	674 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	CHN1	P15882	459 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	TCN1	P20061	433 aa	Predicted RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	ATP6V1C1	P21283	382 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	OMG	P23515	440 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	PCGF2	P35227	344 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	KRT6C	P48668	564 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms