RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LYZL6O75951 148 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 OR12D1P0DN82 309 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 BMP4P12644 408 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 PTAFRP25105 342 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 SLC1A6P48664 564 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 KCNJ10P78508 379 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 DMTNQ08495 405 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 SAXO2Q658L1 398 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 ABLIM2Q6H8Q1 611 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 ZNF781Q8N8C0 355 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 FAM71CQ8NEG0 241 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 ZBTB18Q99592 522 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 SLC35A5Q9BS91 424 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 NAA11Q9BSU3 229 aaPredicted RBP16.47■□□□□ 0.23
LINC01238-205ENST00000567549 QRSL1Q9H0R6 528 aaKnown RBP16.47■□□□□ 0.23
LINC01238-205ENST00000567549 CACYBPQ9HB71 228 aaKnown RBP16.47■□□□□ 0.23
LINC01238-205ENST00000567549 ASB6Q9NWX5 421 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 CISD1Q9NZ45 108 aaKnown RBP16.47■□□□□ 0.23
LINC01238-205ENST00000567549 POU2F3Q9UKI9 436 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 TRAPPC4Q9Y296 219 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 FAM234BA2RU67 622 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 CCT8L1PA6NM43 557 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 H6PDO95479 791 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 DANCRP0C864 163 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 ARRB2P32121 409 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 PGM1P36871 562 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 CDH11P55287 796 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TGFBR3Q03167 851 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 GABPB1Q06547 395 aaPredicted RBP16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TNK1Q13470 666 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TSC22D1Q15714 1073 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TYW3Q6IPR3 259 aaKnown RBP16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TNFAIP8L2Q6P589 184 aaPredicted RBP16.46■□□□□ 0.23
LINC01238-205ENST00000567549 ZNF440Q8IYI8 595 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 PPP1R36Q96LQ0 422 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TRNT1Q96Q11 434 aaKnown RBP16.46■□□□□ 0.23
LINC01238-205ENST00000567549 CCDC106Q9BWC9 280 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TRIM2Q9C040 744 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 TAS2R16Q9NYV7 291 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 BTNL2Q9UIR0 455 aa16.46■□□□□ 0.23
LINC01238-205ENST00000567549 MAGED1Q9Y5V3 778 aaPredicted RBP16.46■□□□□ 0.23
LINC01238-205ENST00000567549 WDR91A4D1P6 747 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 INAFM1C9JVW0 142 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 TLX2O43763 284 aaPredicted RBP16.45■□□□□ 0.22
LINC01238-205ENST00000567549 PGM3O95394 542 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 DHRS4L1P0CG22 281 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 PAX7P23759 505 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 RYKP34925 604 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 DSCR9P59020 149 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 SLC35A1P78382 337 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 STX3Q13277 289 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 SPATA19Q7Z5L4 167 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 ZNF433Q8N7K0 673 aaPredicted RBP16.45■□□□□ 0.22
LINC01238-205ENST00000567549 KBTBD8Q8NFY9 601 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 PANX1Q96RD7 426 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 ZNF300Q96RE9 604 aaPredicted RBP16.45■□□□□ 0.22
LINC01238-205ENST00000567549 SERHL2Q9H4I8 314 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 CTPS2Q9NRF8 586 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 CALML5Q9NZT1 146 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 TMEM181Q9P2C4 612 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 PRSS50Q9UI38 385 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 SLC9A8Q9Y2E8 581 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 FN1P02751 2386 aaKnown RBP16.45■□□□□ 0.22
LINC01238-205ENST00000567549 TLN2Q9Y4G6 2542 aa16.45■□□□□ 0.22
LINC01238-205ENST00000567549 TRPC5OSA6NMA1 111 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ABCD4O14678 606 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ZNF208O43345 1280 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 SOD3P08294 240 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 IGHV1-2P23083 117 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 POLR2HP52434 150 aaKnown RBP16.44■□□□□ 0.22
LINC01238-205ENST00000567549 SLC16A1P53985 500 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 FAPQ12884 760 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ZSWIM7Q19AV6 140 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 FAM174BQ3ZCQ3 159 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 OGFOD2Q6N063 350 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 SLC22A25Q6T423 547 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ABHD12BQ7Z5M8 362 aaPredicted RBP16.44■□□□□ 0.22
LINC01238-205ENST00000567549 DTX2Q86UW9 622 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ANKRD46Q86W74 232 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 C17orf78Q8N4C9 275 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 GLB1L3Q8NCI6 653 aaPredicted RBP16.44■□□□□ 0.22
LINC01238-205ENST00000567549 LILRB1Q8NHL6 650 aaPredicted RBP16.44■□□□□ 0.22
LINC01238-205ENST00000567549 RAB8BQ92930 207 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 CCDC115Q96NT0 180 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 REG4Q9BYZ8 158 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 SLCO5A1Q9H2Y9 848 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ARMC7Q9H6L4 198 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 MTHFD2LQ9H903 347 aaPredicted RBP16.44■□□□□ 0.22
LINC01238-205ENST00000567549 MEAF6Q9HAF1 191 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 UPB1Q9UBR1 384 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 MALT1Q9UDY8 824 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 KCNE5Q9UJ90 142 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 HAO1Q9UJM8 370 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 ING1Q9UK53 422 aaPredicted RBP16.44■□□□□ 0.22
LINC01238-205ENST00000567549 CSPG4Q6UVK1 2322 aa16.44■□□□□ 0.22
LINC01238-205ENST00000567549 PRR14LQ5THK1 2151 aa16.43■□□□□ 0.22
LINC01238-205ENST00000567549 GOLGA8QA0A0J9YX86 632 aa16.43■□□□□ 0.22
LINC01238-205ENST00000567549 GOLGA8OA6NCC3 632 aa16.43■□□□□ 0.22
LINC01238-205ENST00000567549 TMEM247A6NEH6 219 aa16.43■□□□□ 0.22
LINC01238-205ENST00000567549 DPRXA6NFQ7 191 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms