RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 GALNSP34059 522 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 BUD31P41223 144 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 MRPL19P49406 292 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 POLR2JP52435 117 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 ARFIP1P53367 373 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 CLNS1AP54105 237 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 CLDN8P56748 225 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 RASGEF1BQ0VAM2 473 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 GANABQ14697 944 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 NNATQ16517 81 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 PGS1Q32NB8 556 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 SPANXN4Q5MJ08 99 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 FAM91A1Q658Y4 838 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 C18orf63Q68DL7 685 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 MRM1Q6IN84 353 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 FAM71E1Q6IPT2 247 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 TFAP2EQ6VUC0 442 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 FUNDC1Q8IVP5 155 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 FAM9CQ8IZT9 166 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 OR7A2PQ8NGA2 310 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 OR51F2Q8NH61 342 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 ADIPOR1Q96A54 375 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 TM4SF18Q96CE8 201 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 REXO5Q96IC2 774 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 RAB1BQ9H0U4 201 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 NXF5Q9H1B4 397 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 OR10A5Q9H207 317 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 PTGES2Q9H7Z7 377 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 LPAR2Q9HBW0 351 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 LYARQ9NX58 379 aaKnown RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 PDP1Q9P0J1 537 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-216ENST00000567071 PHF11Q9UIL8 331 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 ASB4Q9Y574 426 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 WNK2Q9Y3S1 2297 aa8.5□□□□□ -1.05
CAPN3-216ENST00000567071 LOC105371242A0A075B767 164 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 A0A1B0GUS0 222 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 A0A1W2PR48 441 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 OR2M5A3KFT3 312 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 GLOD5A6NK44 160 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 SLC22A2O15244 555 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 UGT2B11O75310 529 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 LYZL6O75951 148 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 GPR75O95800 540 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 CLPSP04118 112 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 COX4I1P13073 169 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 IFNGR1P15260 489 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 GGT1P19440 569 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 EFNA1P20827 205 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-216ENST00000567071 PRPS1L1P21108 318 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 CD40P25942 277 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 KRT20P35900 424 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 ZNF83P51522 516 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 TNFRSF17Q02223 184 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 SPOCK1Q08629 439 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 KRT72Q14CN4 511 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 MAPRE2Q15555 327 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 ZSCAN26Q16670 478 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.49□□□□□ -1.05
CAPN3-216ENST00000567071 ZNF385BQ569K4 471 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 DESI1Q6ICB0 168 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 FAM180BQ6P0A1 224 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 B3GLCTQ6Y288 498 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 IKBIPQ70UQ0 350 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 C1QL2Q7Z5L3 287 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 GPR180Q86V85 440 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 RIMKLAQ8IXN7 391 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.05
CAPN3-216ENST00000567071 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 VPS33AQ96AX1 596 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 EXOSC8Q96B26 276 aaKnown RBP8.49□□□□□ -1.05
CAPN3-216ENST00000567071 PPCDCQ96CD2 204 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 SPDL1Q96EA4 605 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 FAIM2Q9BWQ8 316 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 REEP4Q9H6H4 257 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 MIEF1Q9NQG6 463 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 MRGBPQ9NV56 204 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 EHD3Q9NZN3 535 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 NPAP1Q9NZP6 1156 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 SH3BP4Q9P0V3 963 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 PPP4R1LQ9P1A2 415 aa8.49□□□□□ -1.05
CAPN3-216ENST00000567071 FBXO9Q9UK97 447 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-216ENST00000567071 CCDC154A6NI56 674 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 WASHC1A8K0Z3 465 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 ANGPT2O15123 496 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 GUCY1B2O75343 617 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 SLC35E2P0CK97 266 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 LAMP1P11279 417 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 DAOP14920 347 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 PGCP20142 388 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 DDCP20711 480 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 S100A3P33764 101 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 LOXL3P58215 753 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 TRA2BP62995 288 aaKnown RBP8.48□□□□□ -1.05
CAPN3-216ENST00000567071 CYLC2Q14093 348 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-216ENST00000567071 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 VPS26BQ4G0F5 336 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 PDSS1Q5T2R2 415 aa8.48□□□□□ -1.05
CAPN3-216ENST00000567071 CPTPQ5TA50 214 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms