RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 PMM1Q92871 262 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 APH1AQ96BI3 265 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 CTPS2Q9NRF8 586 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 CSPG4Q6UVK1 2322 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 FREM1Q5H8C1 2179 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 ZNF716A6NP11 495 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 TM9SF1O15321 606 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 RAMP1O60894 148 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 IGHV4-39P01824 125 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 TP53P04637 393 aaPredicted RBP13.22□□□□□ -0.29
RNF40-209ENST00000566703 LBPP18428 481 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 PTAFRP25105 342 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 MAGEA8P43361 318 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 KHKP50053 298 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 FAPQ12884 760 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 CHI3L2Q15782 390 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 OR7E24Q6IFN5 339 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 WDR93Q6P2C0 686 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 TNFAIP8L2Q6P589 184 aaPredicted RBP13.22□□□□□ -0.29
RNF40-209ENST00000566703 KLHL17Q6TDP4 642 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 ANKRD46Q86W74 232 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 UBE2J2Q8N2K1 259 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 ARFGAP2Q8N6H7 521 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 SPATA3Q8NHX4 192 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 RAB8BQ92930 207 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 ZG16BQ96DA0 208 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 HS6ST2Q96MM7 605 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 ASB6Q9NWX5 421 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 TAS2R16Q9NYV7 291 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 MARCOQ9UEW3 520 aaPredicted RBP13.22□□□□□ -0.29
RNF40-209ENST00000566703 ADAM21Q9UKJ8 722 aa13.22□□□□□ -0.29
RNF40-209ENST00000566703 CIB4A0PJX0 185 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 FAAHO00519 579 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 ABCD4O14678 606 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 ZNF208O43345 1280 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 EIF1BO60739 113 aaKnown RBP13.21□□□□□ -0.29
RNF40-209ENST00000566703 MRPL33O75394 65 aaKnown RBP13.21□□□□□ -0.29
RNF40-209ENST00000566703 DHRS4L1P0CG22 281 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 S100A3P33764 101 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 RYKP34925 604 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 SLC1A6P48664 564 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 ANXA11P50995 505 aaKnown RBP13.21□□□□□ -0.29
RNF40-209ENST00000566703 CDH11P55287 796 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 H3F3AP84243 136 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 CHRNEQ04844 493 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 LRRC74AQ0VAA2 488 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 FUT5Q11128 374 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 GPAT3Q53EU6 434 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 DEPDC4Q8N2C3 294 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 MREGQ8N565 214 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 ARL5BQ96KC2 179 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 PPP1R36Q96LQ0 422 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 ADAD1Q96M93 576 aaKnown RBP13.21□□□□□ -0.29
RNF40-209ENST00000566703 CCDC115Q96NT0 180 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 TRNT1Q96Q11 434 aaKnown RBP13.21□□□□□ -0.29
RNF40-209ENST00000566703 DHRS9Q9BPW9 319 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 MTHFD2LQ9H903 347 aaPredicted RBP13.21□□□□□ -0.29
RNF40-209ENST00000566703 PARPBPQ9NWS1 579 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 NPAP1Q9NZP6 1156 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 MALT1Q9UDY8 824 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 BTNL2Q9UIR0 455 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 B3GALT5Q9Y2C3 310 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.29
RNF40-209ENST00000566703 NSD1Q96L73 2696 aaPredicted RBP13.2□□□□□ -0.3
RNF40-209ENST00000566703 WDR91A4D1P6 747 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 E9PBE3 544 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 HMGN4O00479 90 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 CD5LO43866 347 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
RNF40-209ENST00000566703 TTKP33981 857 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 NTF4P34130 210 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 CHI3L1P36222 383 aaPredicted RBP13.2□□□□□ -0.3
RNF40-209ENST00000566703 IDH2P48735 452 aaKnown RBP13.2□□□□□ -0.3
RNF40-209ENST00000566703 CASP9P55211 416 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 OR2B6P58173 313 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 DSCR9P59020 149 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 SLC35A1P78382 337 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 HPCAP84074 193 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 GNA13Q14344 377 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 GABRA6Q16445 453 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 SPANXN4Q5MJ08 99 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 OGFOD2Q6N063 350 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 LRRC74BQ6ZQY2 392 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.2□□□□□ -0.3
RNF40-209ENST00000566703 TRIML2Q8N7C3 387 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 MAPK1IP1LQ8NDC0 245 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 PKNOX2Q96KN3 472 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 SORT1Q99523 831 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 SLC35A5Q9BS91 424 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
RNF40-209ENST00000566703 C20orf27Q9GZN8 174 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 MEAF6Q9HAF1 191 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 CBLN4Q9NTU7 201 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms