RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NHEJ1Q9H9Q4 299 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 CUTCQ9NTM9 273 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 KLK11Q9UBX7 282 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ENPP5Q9UJA9 477 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 DDX19BQ9UMR2 479 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC22A14Q9Y267 594 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 ATP6V1DQ9Y5K8 247 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 DNMBPQ6XZF7 1577 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 MROH7-TTC4A0A0A0MT08 1334 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 PNPLA6Q8IY17 1366 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 KIAA1210Q9ULL0 1709 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 SNED1Q8TER0 1413 aa2.85□□□□□ -1.95
HERPUD1-211ENST00000566550 KDM5CP41229 1560 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 NWD1Q149M9 1564 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TRAV6A0A075B6T7 132 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 IGHV4OR15-8A0A075B7B6 117 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 IGHV4-61A0A0C4DH41 118 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 KBTBD11-OT1A0A1B0GTJ5 212 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 PRSS37A4D1T9 235 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 IQCF5A8MTL0 148 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF724A8MTY0 619 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 M0R3G1 203 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GOSR2O14653 212 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CALUO43852 315 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 HCN1O60741 890 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 PFKFB2O60825 505 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 PROP1O75360 226 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 NDUFS6O75380 124 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 FCN3O75636 299 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 KLHL2O95198 593 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SMC2O95347 1197 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 LCA5LO95447 670 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ZBTB11O95625 1053 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GLUD1P00367 558 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TSHBP01222 138 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 IGHV4-59P01825 116 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SERPINE2P07093 398 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF853P0CG23 659 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 IGHV4-38-2P0DP08 117 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RNH1P13489 461 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 NQO2P16083 231 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 HOXB8P17481 243 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GABRR2P28476 465 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 IFNA8P32881 189 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SPAM1P38567 509 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GLUD2P49448 558 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 BLVRAP53004 296 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 UBE2MP61081 183 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 PSMC5P62195 406 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RPL8P62917 257 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TUBA1BP68363 451 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RAD51Q06609 339 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ZFP36L1Q07352 338 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ST3GAL3Q11203 375 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RAB40BQ12829 278 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TRAF2Q12933 501 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RIGQ13278 110 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ITGB3BPQ13352 177 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 LAGE3Q14657 143 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CYTH1Q15438 398 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 USF2Q15853 346 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 FAM189A2Q15884 450 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CYBRD1Q53TN4 286 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SEL1L2Q5TEA6 688 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 REEP3Q6NUK4 255 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC25A47Q6Q0C1 308 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SH2D5Q6ZV89 423 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 STXBP4Q6ZWJ1 553 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 MOB2Q70IA6 237 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CREB3L2Q70SY1 520 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 COPS6Q7L5N1 327 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 MRPL21Q7Z2W9 205 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SNX20Q7Z614 316 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RBM23Q86U06 439 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 NUDCD3Q8IVD9 361 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF100Q8IYN0 542 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 OR2L13Q8N349 312 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ARHGAP18Q8N392 663 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TRAM1L1Q8N609 369 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 TMEM178AQ8NBL3 297 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 INO80EQ8NBZ0 244 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 FBXL13Q8NEE6 735 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 OR2T11Q8NH01 316 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 PLPPR1Q8TBJ4 325 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 HPSE2Q8WWQ2 592 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 FAM131CQ96AQ9 280 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 CCDC126Q96EE4 140 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 FAM218AQ96MZ4 157 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF317Q96PQ6 595 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ALS2CR12Q96Q35 445 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 OR5B2Q96R09 309 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 ATP5SQ99766 215 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 FEM1AQ9BSK4 669 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SYT11Q9BT88 431 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 RAB1BQ9H0U4 201 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GOLPH3Q9H4A6 298 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 GLIPR2Q9H4G4 154 aa2.84□□□□□ -1.95
HERPUD1-211ENST00000566550 SMYD3Q9H7B4 428 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms