RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 MAPK1IP1LQ8NDC0 245 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 FAM83FQ8NEG4 500 aaPredicted RBP3.87□□□□□ -1.79
CNOT1-209ENST00000566240 AGAP11Q8TF27 550 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 RASD2Q96D21 266 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 CNOT6LQ96LI5 555 aaKnown RBP3.87□□□□□ -1.79
CNOT1-209ENST00000566240 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 RAB34Q9BZG1 259 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 CHIAQ9BZP6 476 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 IFT52Q9Y366 437 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 EIF4G3O43432 1585 aaKnown RBP3.87□□□□□ -1.79
CNOT1-209ENST00000566240 CLSPNQ9HAW4 1339 aa3.87□□□□□ -1.79
CNOT1-209ENST00000566240 TARBP1Q13395 1621 aaKnown RBP3.87□□□□□ -1.79
CNOT1-209ENST00000566240 FYCO1Q9BQS8 1478 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 PCF11O94913 1555 aaKnown RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 IQGAP2Q13576 1575 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 HECW1Q76N89 1606 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 A0A1B0GWB2 263 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 VSTM2BA6NLU5 285 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 ZNF705EA8MWA4 302 aaPredicted RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 E9PBE3 544 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 CDX4O14627 284 aaPredicted RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 RGS16O15492 202 aaPredicted RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 HCN1O60741 890 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 CLDN9O95484 217 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 RNH1P13489 461 aaKnown RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 RDXP35241 583 aaKnown RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 HNRNPA3P51991 378 aaKnown RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 CXCL6P80162 114 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 CD47Q08722 323 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 QRICH1Q2TAL8 776 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 KLHL38Q2WGJ6 581 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 TIMM50Q3ZCQ8 353 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 OR5M10Q6IEU7 315 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 UQCC3Q6UW78 93 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 UTS2BQ765I0 119 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 SERINC5Q86VE9 423 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 CCDC65Q8IXS2 484 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 BBS5Q8N3I7 341 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 OR2A12Q8NGT7 310 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 OR2L2Q8NH16 312 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 MAGEE2Q8TD90 523 aaPredicted RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 PAQR8Q8TEZ7 354 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 SPATA7Q9P0W8 599 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 RABL2AQ9UBK7 228 aaPredicted RBP3.86□□□□□ -1.79
CNOT1-209ENST00000566240 RSPH14Q9UHP6 348 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 FRMPD3Q5JV73 1810 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 FMN1Q68DA7 1419 aa3.86□□□□□ -1.79
CNOT1-209ENST00000566240 TIAM1Q13009 1591 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 A0A087WWV3 80 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 IGHV3-35A0A0C4DH35 117 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 DHRS7CA6NNS2 312 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 TRDCB7Z8K6 153 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 GOLGA8SH3BPF8 625 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 ZNF254O75437 659 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 ETS2P15036 469 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 COX5AP20674 150 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 HOXD10P28358 340 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 GCKP35557 465 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 LEPP41159 167 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 QARSP47897 775 aaKnown RBP3.85□□□□□ -1.79
CNOT1-209ENST00000566240 VEGFCP49767 419 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 TPMTP51580 245 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 SLC25A1P53007 311 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 SLC10A7Q0GE19 358 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 PLD1Q13393 1074 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 HIGD2BQ4VC39 106 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 PAN3Q58A45 887 aaKnown RBP3.85□□□□□ -1.79
CNOT1-209ENST00000566240 HSP90AB3PQ58FF7 597 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 METAP1DQ6UB28 335 aaPredicted RBP3.85□□□□□ -1.79
CNOT1-209ENST00000566240 H2BFWTQ7Z2G1 175 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 EGFL6Q8IUX8 553 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 GPR65Q8IYL9 337 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 SVOPLQ8N434 492 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 OR52K2Q8NGK3 314 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 C1orf147Q96MC9 270 aaPredicted RBP3.85□□□□□ -1.79
CNOT1-209ENST00000566240 NOL4LQ96MY1 436 aaPredicted RBP3.85□□□□□ -1.79
CNOT1-209ENST00000566240 TRIM62Q9BVG3 475 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 SLITRK2Q9H156 845 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 ZFP14Q9HCL3 533 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 OR1A1Q9P1Q5 309 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 POGZQ7Z3K3 1410 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 GRIN2BQ13224 1484 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 CCDC18Q5T9S5 1454 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 ARAP1Q96P48 1450 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 MAP3K1Q13233 1512 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 SAMD9Q5K651 1589 aa3.85□□□□□ -1.79
CNOT1-209ENST00000566240 SUPT6HQ7KZ85 1726 aaKnown RBP3.84□□□□□ -1.79
CNOT1-209ENST00000566240 A0A1B0GUS0 222 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 IDSB3KWA1 339 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 HAS3O00219 553 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 ZNF354AO60765 605 aaPredicted RBP3.84□□□□□ -1.79
CNOT1-209ENST00000566240 LYPD3O95274 346 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 LALBAP00709 142 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 LGALS2P05162 132 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 STSP08842 583 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 SFTPCP11686 197 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 VDAC1P21796 283 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 KIR2DS2P43631 304 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 CRYBB1P53674 252 aaPredicted RBP3.84□□□□□ -1.79
CNOT1-209ENST00000566240 RPS14P62263 151 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms