RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 DCTN3O75935 186 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 AQP8O94778 261 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 MFN2O95140 757 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 SYNGR4O95473 234 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 PRG2P13727 222 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 SSTR2P30874 369 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 UQCRC1P31930 480 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 APOBEC1P41238 236 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 GLIPR1L2Q4G1C9 344 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 FAM91A1Q658Y4 838 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 GTF2IRD2BQ6EKJ0 949 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 PPP4R4Q6NUP7 873 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 C3orf33Q6P1S2 294 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 HACD2Q6Y1H2 254 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 ZNF550Q7Z398 422 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 ARPINQ7Z6K5 226 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 GTF2IRD2Q86UP8 949 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 COMTD1Q86VU5 262 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 STARD4Q96DR4 205 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 C14orf79Q96F83 325 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 LRRC37BQ96QE4 947 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 CTPS2Q9NRF8 586 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 KCNN3Q9UGI6 736 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 APCP25054 2843 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 PRORSD1PA6NEY8 169 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 CCT8L1PA6NM43 557 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 A8MXE2 369 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 MSTNO14793 375 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 FRS3O43559 492 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 OPN1SWP03999 348 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 NUDT2P50583 147 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 DMTNQ08495 405 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 CCDC80Q76M96 950 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 PATL1Q86TB9 770 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 LUZP2Q86TE4 346 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 KIF18BQ86Y91 864 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 ARMC8Q8IUR7 673 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 SLC15A3Q8IY34 581 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 SLC35B4Q969S0 331 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 CPNE4Q96A23 557 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 REXO5Q96IC2 774 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 HOPXQ9BPY8 73 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 COQ10BQ9H8M1 238 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 GLRX2Q9NS18 164 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 ARL8BQ9NVJ2 186 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 GMPR2Q9P2T1 348 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 OSGIN1Q9UJX0 560 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 PACSIN3Q9UKS6 424 aa12.38□□□□□ -0.43
HERPUD1-210ENST00000565966 FAM220BPB1ANY3 271 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 UQCRBP14927 111 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 TACR3P29371 465 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 SLC7A1P30825 629 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 SLC1A3P43003 542 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 HTR3AP46098 478 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 CPA2P48052 419 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 SLC7A2P52569 658 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 CRYBA2P53672 197 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 RAC3P60763 192 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 HOXC5Q00444 222 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 VEZF1Q14119 521 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 GUSBP1Q15486 140 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 INTS11Q5TA45 600 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 ERICH5Q6P6B1 374 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 VWA1Q6PCB0 445 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 FAM214BQ7L5A3 538 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 LSRQ86X29 649 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 ADGRG3Q86Y34 549 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 SMYD1Q8NB12 490 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 BHLHE22Q8NFJ8 381 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 GPR32P1Q8NGA4 272 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 SLC25A43Q8WUT9 341 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 RBM24Q9BX46 236 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 ADAM19Q9H013 955 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 CHRNA9Q9UGM1 479 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 TAGLN3Q9UI15 199 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 AP3M1Q9Y2T2 418 aa12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 SPIN1Q9Y657 262 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-210ENST00000565966 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 A0A1W2PNR3 127 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 NME4O00746 187 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.437e-11■■■□□ 15.1
HERPUD1-210ENST00000565966 PLGP00747 810 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 CD247P20963 164 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 KIR2DL3P43628 341 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 KCNJ5P48544 419 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 CTBP2P56545 445 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 PSME3P61289 254 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 COPZ1P61923 177 aa12.36□□□□□ -0.43
HERPUD1-210ENST00000565966 SIRPAP78324 504 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms