RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 SLCO1B3Q9NPD5 702 aa13.01□□□□□ -0.33
USB1-210ENST00000565151 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.01□□□□□ -0.33
USB1-210ENST00000565151 KLHL9Q9P2J3 617 aa13.01□□□□□ -0.33
USB1-210ENST00000565151 CHRNA9Q9UGM1 479 aa13.01□□□□□ -0.33
USB1-210ENST00000565151 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
USB1-210ENST00000565151 DSPPQ9NZW4 1301 aa13.01□□□□□ -0.33
USB1-210ENST00000565151 DNHD1Q96M86 4753 aa13□□□□□ -0.33
USB1-210ENST00000565151 TLN2Q9Y4G6 2542 aa13□□□□□ -0.33
USB1-210ENST00000565151 TMED7-TICAM2A0A0A6YYA0 188 aa13□□□□□ -0.33
USB1-210ENST00000565151 TMEM72A0PK05 275 aa13□□□□□ -0.33
USB1-210ENST00000565151 ZNF724A8MTY0 619 aa13□□□□□ -0.33
USB1-210ENST00000565151 SULT2B1O00204 365 aa13□□□□□ -0.33
USB1-210ENST00000565151 RFXANKO14593 260 aa13□□□□□ -0.33
USB1-210ENST00000565151 KLF11O14901 512 aa13□□□□□ -0.33
USB1-210ENST00000565151 SMPD2O60906 423 aa13□□□□□ -0.33
USB1-210ENST00000565151 LYZL6O75951 148 aa13□□□□□ -0.33
USB1-210ENST00000565151 IGHV3-9P01782 118 aa13□□□□□ -0.33
USB1-210ENST00000565151 NUDT7P0C024 238 aa13□□□□□ -0.33
USB1-210ENST00000565151 TFPTP0C1Z6 253 aa13□□□□□ -0.33
USB1-210ENST00000565151 GKN3PP0CG01 181 aa13□□□□□ -0.33
USB1-210ENST00000565151 COX5AP20674 150 aa13□□□□□ -0.33
USB1-210ENST00000565151 APOBEC1P41238 236 aaKnown RBP13□□□□□ -0.33
USB1-210ENST00000565151 ACAA2P42765 397 aaKnown RBP13□□□□□ -0.33
USB1-210ENST00000565151 H3F3AP84243 136 aa13□□□□□ -0.33
USB1-210ENST00000565151 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
USB1-210ENST00000565151 NCMAPQ5T1S8 102 aa13□□□□□ -0.33
USB1-210ENST00000565151 SHEQ5VZ18 495 aa13□□□□□ -0.33
USB1-210ENST00000565151 EPGNQ6UW88 154 aa13□□□□□ -0.33
USB1-210ENST00000565151 C20orf204Q6ZNR8 217 aa13□□□□□ -0.33
USB1-210ENST00000565151 Q6ZT83 130 aa13□□□□□ -0.33
USB1-210ENST00000565151 MTDHQ86UE4 582 aaKnown RBP13□□□□□ -0.33
USB1-210ENST00000565151 FUNDC1Q8IVP5 155 aa13□□□□□ -0.33
USB1-210ENST00000565151 LRRC75A-AS1Q8N1F1 130 aa13□□□□□ -0.33
USB1-210ENST00000565151 CLIP4Q8N3C7 705 aa13□□□□□ -0.33
USB1-210ENST00000565151 ARFGAP2Q8N6H7 521 aa13□□□□□ -0.33
USB1-210ENST00000565151 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
USB1-210ENST00000565151 ZNF563Q8TA94 476 aa13□□□□□ -0.33
USB1-210ENST00000565151 PIWIL2Q8TC59 973 aaKnown RBP13□□□□□ -0.33
USB1-210ENST00000565151 SLC38A5Q8WUX1 472 aa13□□□□□ -0.33
USB1-210ENST00000565151 PIGTQ969N2 578 aa13□□□□□ -0.33
USB1-210ENST00000565151 ADAM19Q9H013 955 aa13□□□□□ -0.33
USB1-210ENST00000565151 PAIP1Q9H074 479 aaKnown RBP13□□□□□ -0.33
USB1-210ENST00000565151 MTHFD2LQ9H903 347 aaPredicted RBP13□□□□□ -0.33
USB1-210ENST00000565151 SLC52A3Q9NQ40 469 aa13□□□□□ -0.33
USB1-210ENST00000565151 NPAP1Q9NZP6 1156 aa13□□□□□ -0.33
USB1-210ENST00000565151 LIPT1Q9Y234 373 aa13□□□□□ -0.33
USB1-210ENST00000565151 TMED7Q9Y3B3 224 aa13□□□□□ -0.33
USB1-210ENST00000565151 CSPG4Q6UVK1 2322 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 UQCRHLA0A096LP55 91 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 TRIM64A6NGJ6 449 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 TRIM64BA6NI03 449 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 SLCO1B7G3V0H7 640 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 HS3ST1O14792 307 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 PMS2P2O95744 297 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 IL6P05231 212 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 ZCCHC18P0CG32 403 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 NR2F1P10589 423 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 TFPIP10646 304 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 PRG2P13727 222 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 IDO1P14902 403 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 FPR1P21462 350 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 PTH2RP49190 550 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 EPS8Q12929 822 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 ITGADQ13349 1161 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 TTMPQ5BVD1 217 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 ATG16L1Q676U5 607 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 SLC2A7Q6PXP3 512 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 BHLHA15Q7RTS1 189 aaPredicted RBP12.99□□□□□ -0.33
USB1-210ENST00000565151 MSRB3Q8IXL7 192 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 GLB1L3Q8NCI6 653 aaPredicted RBP12.99□□□□□ -0.33
USB1-210ENST00000565151 SLC25A43Q8WUT9 341 aaPredicted RBP12.99□□□□□ -0.33
USB1-210ENST00000565151 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
USB1-210ENST00000565151 GTF2H4Q92759 462 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 C18orf12Q96KH6 178 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 Q96MF0 132 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 EBF4Q9BQW3 602 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 HDHD5Q9BXW7 423 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 SERINC1Q9NRX5 453 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 ZNF701Q9NV72 531 aaPredicted RBP12.99□□□□□ -0.33
USB1-210ENST00000565151 NKIRAS1Q9NYS0 192 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 ZIM2Q9NZV7 527 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 SLAMF8Q9P0V8 285 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 USH1CQ9Y6N9 552 aa12.99□□□□□ -0.33
USB1-210ENST00000565151 CDHR4A6H8M9 788 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 H7C1Q1 480 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 SOD3P08294 240 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 INHBBP09529 407 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 PAX1P15863 534 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 IL32P24001 234 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 TACR3P29371 465 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 POLR2JP52435 117 aaKnown RBP12.98□□□□□ -0.33
USB1-210ENST00000565151 P2RY6Q15077 328 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 PDK3Q15120 406 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 GSTA3Q16772 222 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 ZNF836Q6ZNA1 936 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 YTHDF3Q7Z739 585 aaKnown RBP12.98□□□□□ -0.33
USB1-210ENST00000565151 COMTD1Q86VU5 262 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 ZNF433Q8N7K0 673 aaPredicted RBP12.98□□□□□ -0.33
USB1-210ENST00000565151 ZNF611Q8N823 705 aa12.98□□□□□ -0.33
USB1-210ENST00000565151 WDR60Q8WVS4 1066 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms