RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ARHGEF9O43307 516 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 RAMP1O60894 148 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 ERLIN1O75477 346 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 SLC22A3O75751 556 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 LYZL6O75951 148 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 KRT75O95678 551 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 PMS2P2O95744 297 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 IL6P05231 212 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 INHBBP09529 407 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 NR2F1P10589 423 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 TFPIP10646 304 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 CCNA2P20248 432 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 COX5AP20674 150 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 NTF4P34130 210 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 PTH2RP49190 550 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 ANXA11P50995 505 aaKnown RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 CSNK2A1P68400 391 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 TXNL4AP83876 142 aaKnown RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 LRRC74AQ0VAA2 488 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 P2RY6Q15077 328 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 GSTA3Q16772 222 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 GTDC1Q4AE62 458 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 Q6ZT83 130 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 Q71RC1 249 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 BHLHA15Q7RTS1 189 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 YTHDF3Q7Z739 585 aaKnown RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 MTDHQ86UE4 582 aaKnown RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 CMIPQ8IY22 773 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 CIARTQ8N365 385 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 LILRB1Q8NHL6 650 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 PIWIL2Q8TC59 973 aaKnown RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 WDR60Q8WVS4 1066 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 AKAP1Q92667 903 aaKnown RBP eCLIP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 VPS33AQ96AX1 596 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 AURKBQ96GD4 344 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 Q96MF0 132 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 POTEKPQ9BYX7 375 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 GSX2Q9BZM3 304 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 RLIMQ9NVW2 624 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 ZIM2Q9NZV7 527 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 HDGFL3Q9Y3E1 203 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 SPIN1Q9Y657 262 aaPredicted RBP8.88□□□□□ -0.99
CMTM3-209ENST00000565003 NAV3Q8IVL0 2385 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 DSPPQ9NZW4 1301 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 CADP27708 2225 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 TMEM72A0PK05 275 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 CFAP73A6NFT4 308 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 ZNF716A6NP11 495 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 UBDO15205 165 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 IGHV3-9P01782 118 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 BCHEP06276 602 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 ETFAP13804 333 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 IL7RP16871 459 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 IGHV1-2P23083 117 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 TACR3P29371 465 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 ADSLP30566 484 aaPredicted RBP8.87□□□□□ -0.99
CMTM3-209ENST00000565003 EPS8Q12929 822 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 CAPRIN1Q14444 709 aaKnown RBP8.87□□□□□ -0.99
CMTM3-209ENST00000565003 PDK3Q15120 406 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 RPS26P11Q5JNZ5 115 aaPredicted RBP8.87□□□□□ -0.99
CMTM3-209ENST00000565003 NCMAPQ5T1S8 102 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 PRSS57Q6UWY2 283 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 ZNF836Q6ZNA1 936 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 GALNT5Q7Z7M9 940 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 BIVMQ86UB2 503 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 VRK2Q86Y07 508 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 CCDC103Q8IW40 242 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 ZNF100Q8IYN0 542 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 ZNF611Q8N823 705 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 HSD17B8Q92506 261 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 NEUROG1Q92886 237 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 MTHFD2LQ9H903 347 aaPredicted RBP8.87□□□□□ -0.99
CMTM3-209ENST00000565003 TPT1P8Q9HAU6 139 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 EMC3Q9P0I2 261 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 P2RX2Q9UBL9 471 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 OSGIN1Q9UJX0 560 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
CMTM3-209ENST00000565003 TMED7-TICAM2A0A0A6YYA0 188 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 ZC3H12DA2A288 527 aaKnown RBP8.86□□□□□ -0.99
CMTM3-209ENST00000565003 CDHR4A6H8M9 788 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 TRIM64A6NGJ6 449 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 TRIM64BA6NI03 449 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 H7C1Q1 480 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 FAAHO00519 579 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 CLOCKO15516 846 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 DNPH1O43598 174 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 ANP32DO95626 131 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 CNOT4O95628 575 aaKnown RBP8.86□□□□□ -0.99
CMTM3-209ENST00000565003 DBIP07108 87 aaKnown RBP8.86□□□□□ -0.99
CMTM3-209ENST00000565003 TFPTP0C1Z6 253 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 GKN3PP0CG01 181 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 ZCCHC18P0CG32 403 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 IMPDH2P12268 514 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 PAX1P15863 534 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 SLC1A3P43003 542 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 CRATP43155 626 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 MAGEA8P43361 318 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 HTR3AP46098 478 aa8.86□□□□□ -0.99
CMTM3-209ENST00000565003 CLK1P49759 484 aaKnown RBP8.86□□□□□ -0.99
CMTM3-209ENST00000565003 POLR2HP52434 150 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms