RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 WSCD1Q658N2 575 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 VASH2Q86V25 355 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 TBC1D21Q8IYX1 336 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 OR5L2Q8NGL0 311 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 OR2A12Q8NGT7 310 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 HAVCR1Q96D42 359 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 SLC25A38Q96DW6 304 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 CELF6Q96J87 481 aaKnown RBP3.46□□□□□ -1.86
LINC00560-201ENST00000564593 PKNOX2Q96KN3 472 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 AMDHD1Q96NU7 426 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 EDEM2Q9BV94 578 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 VNN3Q9NY84 501 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 LCMT1Q9UIC8 334 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 RPH3ALQ9UNE2 315 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 MOKQ9UQ07 419 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 MAB21L2Q9Y586 359 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 AKAP12Q02952 1782 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 DIP2BQ9P265 1576 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 PLEKHH1Q9ULM0 1364 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 MAP2P11137 1827 aaKnown RBP3.45□□□□□ -1.86
LINC00560-201ENST00000564593 IGHV2-70DA0A0C4DH43 119 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 KLF18A0A0U1RQI7 1052 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 SMIM28A0A1B0GU29 152 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 UGT2B17O75795 530 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 KLK2P20151 261 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 CYP2B6P20813 491 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 ZP3P21754 424 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 GCKP35557 465 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 ARFIP1P53367 373 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 IGLV3-21P80748 117 aaPredicted RBP3.45□□□□□ -1.86
LINC00560-201ENST00000564593 BCL2L1Q07817 233 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 OR2B11Q5JQS5 317 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 TMEM225Q6GV28 225 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 FAM199XQ6PEV8 388 aaPredicted RBP3.45□□□□□ -1.86
LINC00560-201ENST00000564593 MOB1BQ7L9L4 216 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 MOB3BQ86TA1 216 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 FBXO16Q8IX29 292 aaPredicted RBP3.45□□□□□ -1.86
LINC00560-201ENST00000564593 ZNF683Q8IZ20 524 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 KIR3DL3Q8N743 410 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 CRACR2AQ9BSW2 395 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 GLIPR2Q9H4G4 154 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 GORASP2Q9H8Y8 452 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 FANCFQ9NPI8 374 aa3.45□□□□□ -1.86
LINC00560-201ENST00000564593 CDK12Q9NYV4 1490 aaPredicted RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 C15orf38-AP3S2A0A0A6YYH1 394 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 SULT2B1O00204 365 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 TNFSF11O14788 317 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 SETD1AO15047 1707 aaKnown RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 N4BP1O75113 896 aaKnown RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 MTX2O75431 263 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 ALOX5P09917 674 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 P0C879 139 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 GCFC2P16383 781 aaKnown RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 CD80P33681 288 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 GBX2P52951 348 aaPredicted RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 OC90Q02509 493 aaPredicted RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 MESDQ14696 234 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 LIPNQ5VXI9 398 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 CXCL17Q6UXB2 119 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 FRA10AC1Q70Z53 315 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 TRPM8Q7Z2W7 1104 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 TPRA1Q86W33 373 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 DHRSXQ8N5I4 330 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 STEAP2Q8NFT2 490 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 OR52M1Q8NGK5 317 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 PELI1Q96FA3 418 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 CHIAQ9BZP6 476 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 Q9H3A6 140 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 SLC17A5Q9NRA2 495 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 FMN2Q9NZ56 1722 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 ANGPTL2Q9UKU9 493 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 CPS1P31327 1500 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 RAI1Q7Z5J4 1906 aaPredicted RBP3.44□□□□□ -1.86
LINC00560-201ENST00000564593 RIMBP3CA6NJZ7 1639 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 RIMBP3BA6NNM3 1639 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 RIMBP3Q9UFD9 1639 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 ALKQ9UM73 1620 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 PTPRMP28827 1452 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 LRRK1Q38SD2 2015 aa3.44□□□□□ -1.86
LINC00560-201ENST00000564593 TSPOAP1O95153 1857 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 DIP2AQ14689 1571 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 YTHDC2Q9H6S0 1430 aaKnown RBP3.43□□□□□ -1.86
LINC00560-201ENST00000564593 METTL21EPA6NDL7 271 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 ZNF705EA8MWA4 302 aaPredicted RBP3.43□□□□□ -1.86
LINC00560-201ENST00000564593 ARPC3O15145 178 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 SPAG6O75602 509 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 SERF1AO75920 110 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 IGKV3-15P01624 115 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 IGHDP01880 384 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 GLRA2P23416 452 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 KIR2DS2P43631 304 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 OR3A4PP47883 348 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 RPS8P62241 208 aaKnown RBP3.43□□□□□ -1.86
LINC00560-201ENST00000564593 LRRC23Q53EV4 343 aaPredicted RBP3.43□□□□□ -1.86
LINC00560-201ENST00000564593 ATL3Q6DD88 541 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 DNM1P46Q6ZS02 220 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 RGS9BPQ6ZS82 235 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 UBQLNLQ8IYU4 475 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 TMEM123Q8N131 208 aa3.43□□□□□ -1.86
LINC00560-201ENST00000564593 OR4D5Q8NGN0 318 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms