RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SSX8Q7RTT4 187 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 GRINAQ7Z429 371 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 HMGN2P46Q86SG4 172 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 P2RY8Q86VZ1 359 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 LRRC34Q8IZ02 419 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 NUF2Q9BZD4 464 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 SLCO5A1Q9H2Y9 848 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 EXOSC3Q9NQT5 275 aaKnown RBP21.07■□□□□ 0.96
NME3-206ENST00000564252 CISD1Q9NZ45 108 aaKnown RBP21.07■□□□□ 0.96
NME3-206ENST00000564252 MARCOQ9UEW3 520 aaPredicted RBP21.07■□□□□ 0.96
NME3-206ENST00000564252 ADAM21Q9UKJ8 722 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 HDGFL3Q9Y3E1 203 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 OR5H1A6NKK0 313 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 CLDN24A6NM45 220 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 TM9SF1O15321 606 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 RGS16O15492 202 aaPredicted RBP21.06■□□□□ 0.96
NME3-206ENST00000564252 IGHV4-39P01824 125 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 LBPP18428 481 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 NTF4P34130 210 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 ACVR1BP36896 505 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 CLNS1AP54105 237 aaKnown RBP21.06■□□□□ 0.96
NME3-206ENST00000564252 KCNJ10P78508 379 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 CHRNEQ04844 493 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 FBXW9Q5XUX1 488 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 DTX2Q86UW9 622 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 ADGRG3Q86Y34 549 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 DNAJA3Q96EY1 480 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 MDFIQ99750 246 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 SLC35A5Q9BS91 424 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 OR11A1Q9GZK7 315 aa21.06■□□□□ 0.96
NME3-206ENST00000564252 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.06■□□□□ 0.96
NME3-206ENST00000564252 NOSIPQ9Y314 301 aaKnown RBP21.06■□□□□ 0.96
NME3-206ENST00000564252 FBN1P35555 2871 aaKnown RBP21.06■□□□□ 0.96
NME3-206ENST00000564252 CR1P17927 2039 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 ATRQ13535 2644 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 E9PBE3 544 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 HMGN4O00479 90 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 ABCD4O14678 606 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 DNPH1O43598 174 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 NDUFS7O75251 213 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 IGHV3-9P01782 118 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 BGNP21810 368 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 CHI3L1P36222 383 aaPredicted RBP21.05■□□□□ 0.96
NME3-206ENST00000564252 CLK1P49759 484 aaKnown RBP21.05■□□□□ 0.96
NME3-206ENST00000564252 CDH11P55287 796 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 MPP2Q14168 576 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 FAM174BQ3ZCQ3 159 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 GPAT3Q53EU6 434 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 DNM1P46Q6ZS02 220 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 ARFGAP2Q8N6H7 521 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 PIGXQ8TBF5 258 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 ZHX1-C8orf76Q96EF9 292 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 TEX37Q96LM6 180 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 CCDC115Q96NT0 180 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 REG4Q9BYZ8 158 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 GRIP2Q9C0E4 1043 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 MEAF6Q9HAF1 191 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 BTNL2Q9UIR0 455 aa21.05■□□□□ 0.96
NME3-206ENST00000564252 PLCE1Q9P212 2302 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 RAD51DO75771 328 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 FKBP2P26885 142 aaKnown RBP21.04■□□□□ 0.96
NME3-206ENST00000564252 SLC16A1P53985 500 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 LSRQ86X29 649 aaPredicted RBP21.04■□□□□ 0.96
NME3-206ENST00000564252 RNF130Q86XS8 419 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 KIRREL3Q8IZU9 778 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 CNOT9Q92600 299 aaKnown RBP21.04■□□□□ 0.96
NME3-206ENST00000564252 APH1AQ96BI3 265 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 SLC38A1Q9H2H9 487 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 ALG2Q9H553 416 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 PNPOQ9NVS9 261 aa21.04■□□□□ 0.96
NME3-206ENST00000564252 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.04■□□□□ 0.96
NME3-206ENST00000564252 V9GYY5 206 aaPredicted RBP21.04■□□□□ 0.96
NME3-206ENST00000564252 COL6A5A8TX70 2615 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 AP3D1O14617 1153 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 ALDOCP09972 364 aaKnown RBP21.03■□□□□ 0.96
NME3-206ENST00000564252 S100A3P33764 101 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 IDH2P48735 452 aaKnown RBP21.03■□□□□ 0.96
NME3-206ENST00000564252 HPCAP84074 193 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 SYPL1Q16563 259 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 OGFOD2Q6N063 350 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 CCDC103Q8IW40 242 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 UBE2J2Q8N2K1 259 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 ANKFN1Q8N957 763 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 FAIMQ9NVQ4 179 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 MALT1Q9UDY8 824 aa21.03■□□□□ 0.96
NME3-206ENST00000564252 GDF2Q9UK05 429 aaPredicted RBP21.03■□□□□ 0.96
NME3-206ENST00000564252 GPR171O14626 319 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 CRLF1O75462 422 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 CHRM4P08173 479 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 HTR3AP46098 478 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 NME5P56597 212 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 UFM1P61960 85 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 H3F3AP84243 136 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 DMTNQ08495 405 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 STX3Q13277 289 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 TNFAIP8L3Q5GJ75 292 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 CMIPQ8IY22 773 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 RADILQ96JH8 1075 aa21.02■□□□□ 0.96
NME3-206ENST00000564252 TRNT1Q96Q11 434 aaKnown RBP21.02■□□□□ 0.96
NME3-206ENST00000564252 ASB6Q9NWX5 421 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms