RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 RPS3AP61247 264 aaKnown RBP7.64□□□□□ -1.19
UBR1-204ENST00000563239 SGCBQ16585 318 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ZNF239Q16600 458 aaKnown RBP7.64□□□□□ -1.19
UBR1-204ENST00000563239 DUSP7Q16829 419 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 VMACQ2NL98 169 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 FBXL19-AS1Q494R0 122 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 C3orf33Q6P1S2 294 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 VWA1Q6PCB0 445 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 HACD2Q6Y1H2 254 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 CCDC80Q76M96 950 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 CHMP1BQ7LBR1 199 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ZNF550Q7Z398 422 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 KRT73Q86Y46 540 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ARMC8Q8IUR7 673 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 SLC15A3Q8IY34 581 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ANKS4BQ8N8V4 417 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 SMYD1Q8NB12 490 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 PCYOX1LQ8NBM8 494 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 OR4D11Q8NGI4 311 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ROBO4Q8WZ75 1007 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 C3orf49Q96BT1 292 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 TAMM41Q96BW9 452 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 REXO5Q96IC2 774 aaKnown RBP7.64□□□□□ -1.19
UBR1-204ENST00000563239 ARL5BQ96KC2 179 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ZNF607Q96SK3 696 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 SH3GL1Q99961 368 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 SFXN3Q9BWM7 321 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 OR11A1Q9GZK7 315 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 CHST11Q9NPF2 352 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 GID8Q9NWU2 228 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 STOML1Q9UBI4 398 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 CHRNA9Q9UGM1 479 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ING1Q9UK53 422 aaPredicted RBP7.64□□□□□ -1.19
UBR1-204ENST00000563239 PRDM4Q9UKN5 801 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ANGPT4Q9Y264 503 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 ARL2BPQ9Y2Y0 163 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 TMED7Q9Y3B3 224 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 NOTCH2Q04721 2471 aa7.64□□□□□ -1.19
UBR1-204ENST00000563239 GJE1A6NN92 205 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 FAM220BPB1ANY3 271 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ZNF814B7Z6K7 855 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 NME4O00746 187 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SMAD9O15198 467 aaKnown RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 ZNF208O43345 1280 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SS18L1O75177 396 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 NPIPB7O75200 414 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SERPINB7O75635 380 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 LGI1O95970 557 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 CRHP06850 196 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 IMPDH2P12268 514 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 PRF1P14222 555 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 CCNA2P20248 432 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ENPP1P22413 925 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 HTR3AP46098 478 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 KCNJ5P48544 419 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ASCL1P50553 236 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 RAC3P60763 192 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 MYBPHQ13203 477 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 NPTX1Q15818 432 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SYT14P1Q58G82 188 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 PDSS1Q5T2R2 415 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 FAM91A1Q658Y4 838 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 WBP2NLQ6ICG8 309 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 OR2A2Q6IF42 318 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 TMPPEQ6ZT21 453 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 P4HA3Q7Z4N8 544 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 TSPYL5Q86VY4 417 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 SLC30A8Q8IWU4 369 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 DMRTC2Q8IXT2 367 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 LSMEM1Q8N8F7 131 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 RNF128Q8TEB7 428 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ABHD3Q8WU67 409 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SLC25A43Q8WUT9 341 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 DNAJA3Q96EY1 480 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 OR5B2Q96R09 309 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ARHGDIGQ99819 225 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SPOCK3Q9BQ16 436 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ECSITQ9BQ95 431 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SPATA5L1Q9BVQ7 753 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 EFCAB1Q9HAE3 211 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 SERINC1Q9NRX5 453 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 ARL8BQ9NVJ2 186 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 PAQR5Q9NXK6 330 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 ADAM21Q9UKJ8 722 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 CLEC4AQ9UMR7 237 aa7.63□□□□□ -1.19
UBR1-204ENST00000563239 HRNRQ86YZ3 2850 aaPredicted RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 INTS1Q8N201 2190 aaKnown RBP7.63□□□□□ -1.19
UBR1-204ENST00000563239 IGHV3-15A0A0B4J1V0 119 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 PRORSD1PA6NEY8 169 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 A8MXE2 369 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 M0R3H8 397 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 LYPD3O95274 346 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 SYNGR4O95473 234 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 PMS2P2O95744 297 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 FAM107AO95990 144 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 C8BP07358 591 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 FCGR2AP12318 317 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms