RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CCDC22O60826 627 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 RAMP1O60894 148 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 IMPDH2P12268 514 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 COX6B1P14854 86 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 EDNRAP25101 427 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 PRKAR1BP31321 381 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 PCGF2P35227 344 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 OPRM1P35372 400 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 APOBEC1P41238 236 aaKnown RBP12.41□□□□□ -0.42
TPM1-230ENST00000561266 SLC1A3P43003 542 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 ASCL1P50553 236 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 MAPRE2Q15555 327 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 SYT14P1Q58G82 188 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 C3orf33Q6P1S2 294 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 C8orf82Q6P1X6 216 aaPredicted RBP12.41□□□□□ -0.42
TPM1-230ENST00000561266 TSPYL5Q86VY4 417 aaPredicted RBP12.41□□□□□ -0.42
TPM1-230ENST00000561266 CADM2Q8N3J6 435 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 C11orf65Q8NCR3 313 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 OR8J3Q8NGG0 315 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 C3orf49Q96BT1 292 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 TAMM41Q96BW9 452 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 ZFP3Q96NJ6 502 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 SPOCK3Q9BQ16 436 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 CHRNA9Q9UGM1 479 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 APCP25054 2843 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 A8MXE2 369 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 HNRNPRO43390 633 aaKnown RBP12.4□□□□□ -0.42
TPM1-230ENST00000561266 TFPIP10646 304 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 CD247P20963 164 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 UQCRC1P31930 480 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 DIO1P49895 249 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 POLR2HP52434 150 aaKnown RBP12.4□□□□□ -0.42
TPM1-230ENST00000561266 KRTAP10-9P60411 292 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 RBBP4Q09028 425 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 MYBPHQ13203 477 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 NPTX1Q15818 432 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 VMACQ2NL98 169 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 TMPPEQ6ZT21 453 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 NUFIP2Q7Z417 695 aaKnown RBP12.4□□□□□ -0.42
TPM1-230ENST00000561266 RBM45Q8IUH3 476 aaKnown RBP12.4□□□□□ -0.42
TPM1-230ENST00000561266 MCEMP1Q8IX19 187 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 ZNF440Q8IYI8 595 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 ZNF610Q8N9Z0 462 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 RNF128Q8TEB7 428 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 RNASE6Q93091 150 aaKnown RBP12.4□□□□□ -0.42
TPM1-230ENST00000561266 PRRG4Q9BZD6 226 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 STOML1Q9UBI4 398 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 MCTS1Q9ULC4 181 aaKnown RBP12.4□□□□□ -0.42
TPM1-230ENST00000561266 ANGPT4Q9Y264 503 aa12.4□□□□□ -0.42
TPM1-230ENST00000561266 M0R3H8 397 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 NME4O00746 187 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 SS18L1O75177 396 aaPredicted RBP12.39□□□□□ -0.43
TPM1-230ENST00000561266 SYNGR4O95473 234 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 NPPAP01160 153 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 CRHP06850 196 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 SLC7A1P30825 629 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 NTF4P34130 210 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 CPA2P48052 419 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 RAC3P60763 192 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 WBP2NLQ6ICG8 309 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 OR2A2Q6IF42 318 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 FCRLAQ7L513 359 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 ZNF550Q7Z398 422 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 ATG4DQ86TL0 474 aaPredicted RBP12.39□□□□□ -0.43
TPM1-230ENST00000561266 ARMC8Q8IUR7 673 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 TUSC5Q8IXB3 177 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 CPNE4Q96A23 557 aaPredicted RBP12.39□□□□□ -0.43
TPM1-230ENST00000561266 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
TPM1-230ENST00000561266 ZNF300Q96RE9 604 aaPredicted RBP12.39□□□□□ -0.43
TPM1-230ENST00000561266 CCT8L2Q96SF2 557 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 ECSITQ9BQ95 431 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 NSRP1Q9H0G5 558 aaKnown RBP12.39□□□□□ -0.43
TPM1-230ENST00000561266 SERINC1Q9NRX5 453 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 MRGBPQ9NV56 204 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 ARL8BQ9NVJ2 186 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 PACSIN3Q9UKS6 424 aa12.39□□□□□ -0.43
TPM1-230ENST00000561266 GJE1A6NN92 205 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 SULT2B1O00204 365 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 NPIPB7O75200 414 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 SMNDC1O75940 238 aaKnown RBP eCLIP12.38□□□□□ -0.431e-8■■□□□ 11.9
TPM1-230ENST00000561266 LGI1O95970 557 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 FESP07332 822 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 TNFRSF1BP20333 461 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 AGTR1P30556 359 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 KCNJ5P48544 419 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 EGR4Q05215 589 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 NRF1Q16656 503 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 PDSS1Q5T2R2 415 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 CCDC80Q76M96 950 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 FAM214BQ7L5A3 538 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 KRT73Q86Y46 540 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 P3H2Q8IVL5 708 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 CCDC103Q8IW40 242 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms