RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 P2RY8Q86VZ1 359 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 RNF130Q86XS8 419 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ADGRG3Q86Y34 549 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ARFGAP2Q8N6H7 521 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 MUCL1Q96DR8 90 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ARL5BQ96KC2 179 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 TRNT1Q96Q11 434 aaKnown RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 TRIM2Q9C040 744 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 EMC3Q9P0I2 261 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 HDGFL3Q9Y3E1 203 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 CCDC154A6NI56 674 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 ZNF716A6NP11 495 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 DNPH1O43598 174 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 PGM3O95394 542 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 ALDOCP09972 364 aaKnown RBP14.33□□□□□ -0.12
SNX1-213ENST00000561026 GGT1P19440 569 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 PCSK6P29122 969 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 CLK1P49759 484 aaKnown RBP14.33□□□□□ -0.12
SNX1-213ENST00000561026 NME5P56597 212 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 TNK1Q13470 666 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 FBXW9Q5XUX1 488 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 SPATA19Q7Z5L4 167 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 TRIML2Q8N7C3 387 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 ANKFN1Q8N957 763 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 KBTBD8Q8NFY9 601 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 ZBTB9Q96C00 473 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 ZHX1-C8orf76Q96EF9 292 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 TRMT61AQ96FX7 289 aaKnown RBP14.33□□□□□ -0.12
SNX1-213ENST00000561026 PANX1Q96RD7 426 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 PAIP2Q9BPZ3 127 aaKnown RBP14.33□□□□□ -0.12
SNX1-213ENST00000561026 AIG1Q9NVV5 245 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 RAB21Q9UL25 225 aa14.33□□□□□ -0.12
SNX1-213ENST00000561026 AGAP5A6NIR3 686 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 SDHDO14521 159 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 RAMP1O60894 148 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 PGRP06401 933 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 IL12AP29459 219 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 IDH2P48735 452 aaKnown RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 TXNL4AP83876 142 aaKnown RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 ETFDHQ16134 617 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 SYPL1Q16563 259 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 PGGHGQ32M88 737 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 CMIPQ8IY22 773 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 ZNF433Q8N7K0 673 aaPredicted RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 CNOT9Q92600 299 aaKnown RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 GTPBP3Q969Y2 492 aaKnown RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 APH1AQ96BI3 265 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 OR52E6Q96RD3 313 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 INPP5KQ9BT40 448 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 OR11A1Q9GZK7 315 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 SLC38A1Q9H2H9 487 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 TRAPPC4Q9Y296 219 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 NOSIPQ9Y314 301 aaKnown RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 MAGED1Q9Y5V3 778 aaPredicted RBP14.32□□□□□ -0.12
SNX1-213ENST00000561026 GPR45Q9Y5Y3 372 aa14.32□□□□□ -0.12
SNX1-213ENST00000561026 A0A1W2PP18 115 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 OR5H1A6NKK0 313 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 GPR171O14626 319 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 IGHV3-9P01782 118 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 CHRM4P08173 479 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 NTF4P34130 210 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 CDKN2CP42773 168 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 HTR3AP46098 478 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 ANXA11P50995 505 aaKnown RBP14.31□□□□□ -0.12
SNX1-213ENST00000561026 SLC16A1P53985 500 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 H3F3AP84243 136 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 LRRC74AQ0VAA2 488 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 CLEC12BQ2HXU8 276 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 HHATQ5VTY9 493 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 LRRC74BQ6ZQY2 392 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 ZNF621Q6ZSS3 439 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 CROCCP2Q86T23 111 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 CCDC103Q8IW40 242 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 UBE2J2Q8N2K1 259 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 PIGXQ8TBF5 258 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 DNAJA3Q96EY1 480 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 CISD1Q9NZ45 108 aaKnown RBP14.31□□□□□ -0.12
SNX1-213ENST00000561026 NPAP1Q9NZP6 1156 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 TMEM181Q9P2C4 612 aa14.31□□□□□ -0.12
SNX1-213ENST00000561026 GOLGA8QA0A0J9YX86 632 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 GOLGA8OA6NCC3 632 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 SHISA9B4DS77 424 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 INAFM1C9JVW0 142 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 GOLGA8NF8WBI6 632 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 AP3D1O14617 1153 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 HDAC3O15379 428 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 CD8AP01732 235 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 CCNA2P20248 432 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 EPHA3P29320 983 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 IDUAP35475 653 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 CDKN1AP38936 164 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 WDR4P57081 412 aaKnown RBP14.3□□□□□ -0.12
SNX1-213ENST00000561026 OR2B6P58173 313 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 PPP2R2BQ00005 443 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 VEZF1Q14119 521 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 PRIMA1Q86XR5 153 aa14.3□□□□□ -0.12
SNX1-213ENST00000561026 ANKRD42Q8N9B4 389 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms