RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 A0A0C4DFX4 3053 aa11.77□□□□□ -0.52
SNX1-211ENST00000560829 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 A0A1W2PPW3 197 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 FAM86C2PA6NEL3 165 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 WWP2O00308 870 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 GNB5O14775 395 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 STK17BO94768 372 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 NDUFB2O95178 105 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 SLC2A10O95528 541 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 RAB36O95755 333 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 DLGAP3O95886 979 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 PEPDP12955 493 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 HTR1FP30939 366 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 LIPAP38571 399 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 TMED10P49755 219 aaKnown RBP11.77□□□□□ -0.53
SNX1-211ENST00000560829 MLLT10P55197 1068 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 CDH11P55287 796 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 FOXK2Q01167 660 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 CBFBQ13951 182 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 RAB11FIP2Q7L804 512 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 GID4Q8IVV7 300 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 SLC15A4Q8N697 577 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 PROKR2Q8NFJ6 384 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 ZNF563Q8TA94 476 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 RNFT2Q96EX2 444 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 SH3YL1Q96HL8 342 aaPredicted RBP11.77□□□□□ -0.53
SNX1-211ENST00000560829 IMMP1LQ96LU5 166 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 TAAR9Q96RI9 348 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 IFT27Q9BW83 186 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 SPRY4Q9C004 299 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 RACGAP1Q9H0H5 632 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 ERGIC3Q9Y282 383 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 PCDHGB6Q9Y5F9 930 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 HS3ST3B1Q9Y662 390 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 GPR179Q6PRD1 2367 aa11.77□□□□□ -0.53
SNX1-211ENST00000560829 TEX51A0A1B0GUA7 166 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 DKK1O94907 266 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 IGHEP01854 428 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 COX6A1P12074 109 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 CD36P16671 472 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 TACR3P29371 465 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 PEX19P40855 299 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 FBXW4P57775 412 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 EGR4Q05215 589 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 AQP6Q13520 282 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 EXT1Q16394 746 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 ZNF74Q16587 644 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 ZNF362Q5T0B9 420 aaPredicted RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 CXXC5Q7LFL8 322 aaKnown RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 NANOGP1Q8N7R0 232 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 B4GALNT2Q8NHY0 566 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 OR5M11Q96RB7 305 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 PCDHGA3Q9Y5H0 932 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 ASCC3Q8N3C0 2202 aaKnown RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 PLD2O14939 933 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 SLC22A1O15245 554 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 SCO2O43819 266 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 FBXO45P0C2W1 286 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 ITPKBP27987 946 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 SUMO3P55854 103 aaPredicted RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 DLX5P56178 289 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 C17orf67Q0P5P2 114 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 EIF3IQ13347 325 aaKnown RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 TMED1Q13445 227 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 TOMM34Q15785 309 aaPredicted RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 ANKDD1AQ495B1 522 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 ARMCX4Q5H9R4 360 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 NIPAL3Q6P499 406 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 ARHGAP11AQ6P4F7 1023 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 C19orf48Q6RUI8 117 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 CPOQ8IVL8 374 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 M1APQ8TC57 530 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 SLC22A8Q8TCC7 542 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 GPR119Q8TDV5 335 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 THAP3Q8WTV1 239 aaPredicted RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 GPX7Q96SL4 187 aaPredicted RBP11.76□□□□□ -0.53
SNX1-211ENST00000560829 MGLLQ99685 303 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 DCUN1D5Q9BTE7 237 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 MND1Q9BWT6 205 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 JAM3Q9BX67 310 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 DEFB126Q9BYW3 111 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 MMP25Q9NPA2 562 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 CHRNA9Q9UGM1 479 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 OSGIN1Q9UJX0 560 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 HIF3AQ9Y2N7 669 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
SNX1-211ENST00000560829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
SNX1-211ENST00000560829 C17orf51A8MQB3 221 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 M0R3G1 203 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 ARPC3O15145 178 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 PPP1R3DO95685 299 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 RAB40ALP0C0E4 278 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 FOLR3P41439 243 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 RGS6P49758 472 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 PRPS1P60891 318 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 BTBD16Q32M84 506 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 C6orf15Q6UXA7 325 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms