RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MEIOBQ8N635 442 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 HORMAD2Q8N7B1 307 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RASGEF1AQ8N9B8 481 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 ZNF527Q8NB42 609 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TP53I13Q8NBR0 393 aaPredicted RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 MORN4Q8NDC4 146 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 GPR32P1Q8NGA4 272 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 OR4M2Q8NGB6 313 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 OR2T35Q8NGX2 323 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 TRMT10AQ8TBZ6 339 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 BRIX1Q8TDN6 353 aaKnown RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SMIM4Q8WVI0 70 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RAB40AQ8WXH6 277 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 NSMAFQ92636 917 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 FGF11Q92914 225 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 PTP4A1Q93096 173 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 NEIL2Q969S2 332 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 CCDC120Q96HB5 630 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 DPCDQ9BVM2 203 aaPredicted RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RAB11FIP5Q9BXF6 653 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SLITRK2Q9H156 845 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SLC25A32Q9H2D1 315 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 C6orf106Q9H6K1 298 aaPredicted RBP7.94□□□□□ -1.14
CCDC33-209ENST00000560565 CXorf36Q9H7Y0 433 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 ERVMER34-1Q9H9K5 563 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 NANSQ9NR45 359 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 PCDHB16Q9NRJ7 776 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SLC39A1Q9NY26 324 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 KLHL9Q9P2J3 617 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RHCGQ9UBD6 479 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 RPS6KB2Q9UBS0 482 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SERGEFQ9UGK8 458 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 FBXL3Q9UKT7 428 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 SPATA2Q9UM82 520 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 ENTPD4Q9Y227 616 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 ZNF175Q9Y473 711 aa7.94□□□□□ -1.14
CCDC33-209ENST00000560565 DOPEY1Q5JWR5 2465 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3DA0A087WVF3 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3IA0A087WXS9 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3EA0A087X179 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3KA0A087X1G2 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 CDHR4A6H8M9 788 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3FA6NER0 549 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3LB9A6J9 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 GABARAPH6UMI1 98 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 AIPO00170 330 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 HMGN4O00479 90 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 CDX4O14627 284 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 ABCD4O14678 606 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 BCAT2O15382 392 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 PRAMEF4O60810 478 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 HOXD4P09016 255 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3HP0C7X1 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 PSMB1P20618 241 aaKnown RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 MECP2P51608 486 aaKnown RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 CCR8P51685 355 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 GAS1P54826 345 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 DLX5P56178 289 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 CTBP2P56545 445 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 PCBP4P57723 403 aaKnown RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 KIAA1024LP59773 190 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 YPEL5P62699 121 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 POU6F2P78424 691 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 SSBP1Q04837 148 aaKnown RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 LGALS3BPQ08380 585 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 UAP1L1Q3KQV9 507 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 NHLRC3Q5JS37 347 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 OR2G6Q5TZ20 316 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 PRAMEF9Q5VWM5 478 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3GQ6DHY5 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3CQ6IPX1 549 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 LIN54Q6MZP7 749 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TNFAIP8L2Q6P589 184 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TMEM220Q6QAJ8 160 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 ASB18Q6ZVZ8 466 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 MBOAT2Q6ZWT7 520 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 UTS2BQ765I0 119 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 MEPCEQ7L2J0 689 aaKnown RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 LRRTM4Q86VH4 590 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TIGD4Q8IY51 512 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TBC1D3Q8IZP1 549 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 SYS1Q8N2H4 156 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 OR2L2Q8NH16 312 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 OR5W2Q8NH69 310 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 OR5AK3PQ8NH89 298 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 SMAP2Q8WU79 429 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 SPRYD4Q8WW59 207 aaPredicted RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 GIMAP1Q8WWP7 306 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 KAT2AQ92830 837 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 ARHGDIGQ99819 225 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 UTP23Q9BRU9 249 aaKnown RBP7.93□□□□□ -1.14
CCDC33-209ENST00000560565 TIMM29Q9BSF4 260 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 ALG8Q9BVK2 526 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 ZNF416Q9BWM5 594 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 RNF32Q9H0A6 362 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 SHARPINQ9H0F6 387 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 C20orf85Q9H1P6 137 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 OR2AG1Q9H205 316 aa7.93□□□□□ -1.14
CCDC33-209ENST00000560565 RERGLQ9H628 205 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms