RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 GOSR1O95249 250 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 ZCCHC18P0CG32 403 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 TFPIP10646 304 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 CCNA2P20248 432 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 DNASE1P24855 282 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 IDH2P48735 452 aaKnown RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 STX1BP61266 288 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 PPP2R2AP63151 447 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 RNPS1Q15287 305 aaKnown RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 SYT14P1Q58G82 188 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 TMEM201Q5SNT2 666 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 MSANTD1Q6ZTZ1 278 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 FUNDC1Q8IVP5 155 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 WDR60Q8WVS4 1066 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 GTF2H4Q92759 462 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 ZNF775Q96BV0 537 aaPredicted RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 PIK3IP1Q96FE7 263 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 CITED4Q96RK1 184 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 PAIP1Q9H074 479 aaKnown RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 ARGLU1Q9NWB6 273 aaPredicted RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 ZNF226Q9NYT6 803 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 KLHL13Q9P2N7 655 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 P2RX2Q9UBL9 471 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 ING1Q9UK53 422 aaPredicted RBP13.08□□□□□ -0.32
IDH3A-219ENST00000560414 PCDHB14Q9Y5E9 798 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 SMAD9O15198 467 aaKnown RBP13.07□□□□□ -0.32
IDH3A-219ENST00000560414 BCHEP06276 602 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 THBDP07204 575 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 YES1P07947 543 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 TFPTP0C1Z6 253 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 CD1EP15812 388 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 IL7RP16871 459 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 CRYGSP22914 178 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
IDH3A-219ENST00000560414 DIO1P49895 249 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 DSTNP60981 165 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
IDH3A-219ENST00000560414 MRPL2Q5T653 305 aaKnown RBP13.07□□□□□ -0.32
IDH3A-219ENST00000560414 TMPPEQ6ZT21 453 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 BEND4Q6ZU67 534 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 GRINAQ7Z429 371 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 STK32CQ86UX6 486 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 ADGRG3Q86Y34 549 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 CMIPQ8IY22 773 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 SLC43A2Q8N370 569 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 SLC38A5Q8WUX1 472 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 THOC1Q96FV9 657 aaKnown RBP13.07□□□□□ -0.32
IDH3A-219ENST00000560414 ARL5BQ96KC2 179 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 FOXC2Q99958 501 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 PSD2Q9BQI7 771 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 CCDC28BQ9BUN5 200 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 OR11A1Q9GZK7 315 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 RLIMQ9NVW2 624 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 CCDC167Q9P0B6 97 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 SLAMF8Q9P0V8 285 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 CHRNA9Q9UGM1 479 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 FREM1Q5H8C1 2179 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 PRR14LQ5THK1 2151 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 MED13LQ71F56 2210 aa13.07□□□□□ -0.32
IDH3A-219ENST00000560414 SULT2B1O00204 365 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 NR5A2O00482 541 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 SASH3O75995 380 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 ATE1O95260 518 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 RAF1P04049 648 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 DBIP07108 87 aaKnown RBP13.06□□□□□ -0.32
IDH3A-219ENST00000560414 FESP07332 822 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 BMP4P12644 408 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 MAGEA8P43361 318 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 MRPL19P49406 292 aaKnown RBP13.06□□□□□ -0.32
IDH3A-219ENST00000560414 RASGEF1BQ0VAM2 473 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 KEAP1Q14145 624 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 GNA13Q14344 377 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 TFAP2EQ6VUC0 442 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 CXorf67Q86X51 503 aaPredicted RBP13.06□□□□□ -0.32
IDH3A-219ENST00000560414 OR52P1PQ8NH57 321 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 SLC25A43Q8WUT9 341 aaPredicted RBP13.06□□□□□ -0.32
IDH3A-219ENST00000560414 CKAP2Q8WWK9 683 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 TMEM19Q96HH6 336 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 ZNF300Q96RE9 604 aaPredicted RBP13.06□□□□□ -0.32
IDH3A-219ENST00000560414 GSX2Q9BZM3 304 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 ACTR6Q9GZN1 396 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 KLHL9Q9P2J3 617 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 EDARQ9UNE0 448 aa13.06□□□□□ -0.32
IDH3A-219ENST00000560414 MAP1AP78559 2803 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-219ENST00000560414 ITPR3Q14573 2671 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 A0A096LPI6 279 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 TMED7-TICAM2A0A0A6YYA0 188 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 CFAP73A6NFT4 308 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 CLIC1O00299 241 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 CYTIPO60759 359 aa13.05□□□□□ -0.32
IDH3A-219ENST00000560414 GCM2O75603 506 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-219ENST00000560414 HOXB9P17482 250 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms