RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LIN52Q52LA3 116 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 SYT14P1Q58G82 188 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF836Q6ZNA1 936 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 TMPPEQ6ZT21 453 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ADGRG3Q86Y34 549 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF440Q8IYI8 595 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 SLC43A2Q8N370 569 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ATP6V1C2Q8NEY4 427 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF563Q8TA94 476 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ROBO4Q8WZ75 1007 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 REXO5Q96IC2 774 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 DLL4Q9NR61 685 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CTPS2Q9NRF8 586 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CHRNA9Q9UGM1 479 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CLEC4AQ9UMR7 237 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF443Q9Y2A4 671 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CHST2Q9Y4C5 530 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 ACANP16112 2415 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CFAP73A6NFT4 308 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 CASKO14936 926 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 PRKD3O94806 890 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 PGM3O95394 542 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ARAFP10398 606 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ETS2P15036 469 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ENPP1P22413 925 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 AGTR1P30556 359 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 CCKARP32238 428 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ACAA2P42765 397 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 SLC1A3P43003 542 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 CTBP2P56545 445 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ADAM8P78325 824 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 FOXD4Q12950 439 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 RPS26P11Q5JNZ5 115 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 VRK2Q86Y07 508 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 BBS10Q8TAM1 723 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ABHD3Q8WU67 409 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 MAL2Q969L2 176 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 SLC35B4Q969S0 331 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 TACO1Q9BSH4 297 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 SPATA9Q9BWV2 254 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 TMEM120AQ9BXJ8 343 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ADAM19Q9H013 955 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 IKZF5Q9H5V7 419 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 TMEM38AQ9H6F2 299 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 BCO1Q9HAY6 547 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 KLHL13Q9P2N7 655 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 LEF1Q9UJU2 399 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 CORO2BQ9UQ03 480 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 IFT52Q9Y366 437 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 NDUFAF1Q9Y375 327 aa13.52□□□□□ -0.25
SNRPA1-210ENST00000560383 SMAD9O15198 467 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF208O43345 1280 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 CYTIPO60759 359 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 TROVE2P10155 538 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 UQCRBP14927 111 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 UGT2B10P36537 528 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 DIO1P49895 249 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 LARS2Q15031 903 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 RUNDC3AQ59EK9 446 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 GCNT6Q5T4J0 391 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 CGB2Q6NT52 195 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 RETREG3Q86VR2 466 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 CLIP4Q8N3C7 705 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 OR5B2Q96R09 309 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 CPPED1Q9BRF8 314 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 MRGBPQ9NV56 204 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 FGFR1OP2Q9NVK5 253 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF226Q9NYT6 803 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 METRNQ9UJH8 293 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 OSGIN1Q9UJX0 560 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 ZNF232Q9UNY5 417 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 HDGFL3Q9Y3E1 203 aa13.51□□□□□ -0.25
SNRPA1-210ENST00000560383 TMED7-TICAM2A0A0A6YYA0 188 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 A0A1W2PPR1 153 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 EVPLLA8MZ36 301 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 C16orf97H3BN30 126 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 DNPH1O43598 174 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 PMS2P2O95744 297 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 YES1P07947 543 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 POU2F1P14859 743 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 CD53P19397 219 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 TACR3P29371 465 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 HOXC12P31275 282 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 POLR2HP52434 150 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 CSNK2A1P68400 391 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 PDK3Q15120 406 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 ADRM1Q16186 407 aa13.5□□□□□ -0.25
SNRPA1-210ENST00000560383 TMEM201Q5SNT2 666 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms